 |
Job Description | P0A6D5 | Confidence | 96.86% | Date | Thu Jan 5 11:02:53 GMT 2012 |
Rank | 270 | Aligned Residues | 48 |
% Identity | 19% | Template | c3o38D_ |
PDB info |
PDB header:oxidoreductase | Chain: D: PDB Molecule:short chain dehydrogenase; |
PDBTitle: crystal structure of a short chain dehydrogenase from mycobacterium2 smegmatis
|
Resolution | 1.95 Å |
|
  |   |
122 | . | . | . | . | . | . | . | 130 | . | . | |
. | |
. | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
| . |
| . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | K | G | K | T | M | V | L | L | G | A | . |
G | . |
G | A | S | T | A | I | G | A | Q | G | A | I | E | G | L | K | E | I | K | L | F | N | R | R | D | E | F | F | D | K | A | L | A | F | A | Q | R |
Query Conservation |   |
  |   |   |
|   |
|
|
|
|
|
| . |
| . |
|
|
|
|
|   |   |   |
|
|   |   |   |
|   |   |   |
|   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |
|
|
|
|
|
|
|   |
|
|
|
|   |
|   |
|   |   |
|
|   |   |
|
| . |   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
L | K | G | K | V | V | L | V | T | A | A | A | G | T | G | I | G | S | T | T | A | R | R | A | L | L | E | G | A | . |
D | V | V | I | S | D | Y | H | E | R | R | L | G | E | T | R | D | Q | L | A | D |
Template Known Secondary structure |   |
T | T | T |
|  |  |  |  | S | S |
| S | S | S | S |  |  |  |  |  |  |  |  |  |  |  | T | T |
| . |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | |
. | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|