Job Description P0A6D5 Confidence 97.97% Date Thu Jan 5 11:02:53 GMT 2012 Rank 62 Aligned Residues 183 % Identity 16% Template c3nglA_ PDB info PDB header:oxidoreductase, hydrolase Chain: A: PDB Molecule:bifunctional protein fold; PDBTitle: crystal structure of bifunctional 5,10-methylenetetrahydrofolate2 dehydrogenase / cyclohydrolase from thermoplasma acidophilum Resolution 2.40 Å

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		28	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.			.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure										.																									.																.	.
Query SS confidence										.																									.																.	.
Query Sequence		K	A	L	E	K	A	G	L	.	P	F	T	Y	M	A	F	E	V	D	N	D	S	F	P	G	A	I	E	G	L	K	A	L	.	K	M	R	G	T	G	V	S	M	P	N	K	Q	L	A	.	.	C	E	Y	V	D	E	L	T	P	A	A	K	L	V	G	A	I	N	T	I	V	N	D	D	G	Y	L	R	G
Query Conservation										.																									.																.	.
Alig confidence										.																									.																.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	R	G	K	K	I	G	I	A	V	D	L	E	K	Y	D	D	I	S	M	K	D	L	L	K	R	I	D	D	L	A	K	D	P	Q	I	N	G	I	M	I	E	N	P	L	P	K	G	F	D	Y	Y	E	I	V	R	N	I	P	Y	Y	K	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								T									S	S																	T	T								S				T	T							G	G	G	S		G	G	G	B	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		104	.	.	.	.	.																						110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Query Sequence		Y	N	T	D	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	H	I	R	A	I	K	E	S	G	F	D	I	K	G	K	T	M	V	L	L	G	A	G	G	.	A	S	T	A	I	G	A	Q	G	A	I	E	G	L	K	E	I	K	L	F	N	R	R	D	E	F	F
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Alig confidence		.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.														.															.									.	.	.	.
Template Conservation		.	.	.																																			.	.																													.									.	.	.	.
Template Sequence		.	.	.	D	A	L	S	P	Y	N	Q	G	L	I	A	L	N	R	E	F	L	V	P	A	T	P	R	A	V	I	D	I	M	D	Y	Y	G	.	.	Y	H	E	N	T	V	T	I	V	N	R	S	P	V	V	G	R	P	L	S	M	M	L	L	N	R	N	Y	.	T	V	S	V	C	H	S	K	.	.	.	.
Template Known Secondary structure		.	.	.	T			S									T	T			S	S																T	.	.			S										T	T	T											T	T		.							T	T	.	.	.	.
Template Predicted Secondary structure		.	.	.																																			.	.																													.									.	.	.	.
Template SS confidence
					114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		D	K	A	L	A	F	A	Q	R	V	N	E	N	T	D	C	V	V	T	V	T	D	L	A	D	Q	Q	A	F	A	E	A	L	A	S	A	D	I	L	T	N	G	T	K	V	G	M	K	P	L	E	N	E	S	L	V	N	D	I	S	L	L	H	P	G	L	L	V	T	E	C	V	Y	N	P	H	M	T	K	.
Query Conservation																																																																																	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.																													.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	K	D	I	G	S	M	T	R	S	S	K	I	V	V	V	A	V	.	.	.	.	.	.	.	.	G	R	P	G	F	L	N	R	E	M	V	T	P	G	S	V	V	I	D	V	G	I	N	Y	V	N	D	K	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T								S	S							.	.	.	.	.	.	.	.			T	T		B		G	G	G			T	T											S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template SS confidence
																											184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.									.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
							241	.	.	.	.	.	.	.	.	250	.	.		.	.	.							.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.													.				.	.	.	.	.	.
Query SS confidence		.	.	.	.	.													.				.	.	.	.	.	.
Query Sequence		.	.	.	.	.	L	L	Q	Q	A	Q	Q	A	G	C	K	T	.	I	D	G	.	.	.	.	.	.	Y	G	M	L	L	W	Q	G	A	E	Q	F	T	L
Query Conservation		.	.	.	.	.													.				.	.	.	.	.	.
Alig confidence		.	.	.	.	.													.				.	.	.	.	.	.
Template Conservation
Template Sequence		V	G	D	A	N	F	E	D	L	S	E	Y	V	E	A	I	T	P	V	P	G	G	V	G	P	I	T	A	T	N	I	L	E	N	V	V	K	A	A	E	F
Template Known Secondary structure				S	B							T	T	S	S					T	T	T	S	S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions