Job Description P0A6D5 Confidence 96.93% Date Thu Jan 5 11:02:53 GMT 2012 Rank 246 Aligned Residues 130 % Identity 13% Template c2w2kB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:d-mandelate dehydrogenase; PDBTitle: crystal structure of the apo forms of rhodotorula graminis2 d-mandelate dehydrogenase at 1.8a. Resolution 1.85 Å

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		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		G	Y	N	T	D	G	T	G	H	I	R	A	I	K	E	S	G	F	D	I	K	G	K	T	M	V	L	L	G	A	G	G	A	S	T	A	I	G	A	.	Q	G	A	I	E	G	L	K	E	I	K	L	F	N	R	R	D	E	F	F	D	K	A	L	A	F	A	Q	R	V	N	E	N	T	D	C	V	V	T	V
Query Conservation																																									.
Alig confidence																																									.								.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	D	P	E	T	F	N	R	V	H	L	E	I	G	K	S	A	H	N	P	R	G	H	V	L	G	A	V	G	L	G	A	I	Q	K	E	I	A	R	K	A	V	H	G	L	G	M	.	K	L	V	Y	Y	D	V	A	P	A	D	A	E	T	E	K	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure															T	T	T				S	T	T	S								S													T	T			.							S	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		T	D	L	A	D	Q	Q	A	F	A	E	A	L	A	S	A	D	I	L	T	N	G	T	K	V	G	M	K	P	L	E	N	E	S	L	V	N	D	I	S	L	L	H	P	G	L	L	V	T	E	C	V	Y	N	P	H	M	.	T	K	L	L	Q	Q	A	Q	Q	A	G
Query Conservation																																																											.
Alig confidence		.																												.																													.
Template Conservation		.																												.
Template Sequence		.	G	A	E	R	V	D	S	L	E	E	L	A	R	R	S	D	C	V	S	V	S	V	P	Y	M	K	L	.	T	H	H	L	I	D	E	A	F	F	A	A	M	K	P	G	S	R	I	V	N	T	A	R	G	P	V	I	S	Q	D	A	L	I	A	A	L	K	S	G
Template Known Secondary structure		.	T					S	S									S									S	G	G	.	G	T	T		B								S		T	T							S		G	G	G	B											T	T
Template Predicted Secondary structure		.																												.
Template SS confidence
			207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions