Job Description P0A6D5 Confidence 97.86% Date Thu Jan 5 11:02:53 GMT 2012 Rank 67 Aligned Residues 128 % Identity 16% Template c2ph5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:homospermidine synthase; PDBTitle: crystal structure of the homospermidine synthase hss from legionella2 pneumophila in complex with nad, northeast structural genomics target3 lgr54 Resolution 2.50 Å

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		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.				.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.				.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.																																									.	.	.
Query SS confidence																									.	.	.																																									.	.	.
Query Sequence		G	K	T	M	V	L	L	G	A	G	G	A	S	T	A	I	G	A	Q	G	A	I	E	.	.	.	G	L	K	E	I	K	L	F	N	R	R	D	E	F	F	D	K	A	L	A	F	A	Q	R	V	N	E	N	T	D	C	V	V	T	V	T	D	L	A	D	.	.	.	Q	Q	A	F	A	E	A	L	A	S	A
Query Conservation																									.	.	.																																									.	.	.
Alig confidence																									.	.	.																	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.
Template Sequence		K	N	R	F	V	I	L	G	F	G	C	V	G	Q	A	L	X	P	L	I	F	E	K	F	D	I	K	P	S	Q	V	T	I	I	A	A	E	G	T	K	V	D	.	.	.	.	.	.	.	.	V	A	Q	Q	Y	G	V	S	F	K	L	Q	Q	I	T	P	Q	N	Y	L	E	V	I	G	S	T	L	E	E	N
Template Known Secondary structure			S								S														B				G	G	G						S	S			S			.	.	.	.	.	.	.	.						T										T	T	T					T	G	G	G			T	T
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.									.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.										240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.								.	.	.	.	260	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Query Sequence		D	I	L	T	N	G	T	K	V	G	M	K	P	L	E	N	E	S	L	V	N	D	I	S	L	L	H	P	G	L	L	V	T	E	C	V	Y	N	P	H	M	T	.	.	.	.	.	.	.	.	.	K	L	L	Q	Q	A	Q	Q	A	G	C	K	T	I	D	G	.	.	.	.	.	.	.	Y	G	M	L	L	W
Query Conservation																																												.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.
Template Sequence		D	F	L	I	D	V	S	I	.	.	.	.	.	.	G	I	S	S	L	A	L	I	I	L	C	N	Q	K	G	A	L	Y	I	N	A	A	T	E	P	W	K	E	R	R	T	N	Y	S	L	R	E	E	V	L	R	L	K	D	K	T	Q	K	T	A	L	I	T	H	G	A	N	P	G	L	V	S	H	F	I	K
Template Known Secondary structure									S	.	.	.	.	.	.	S	S													T						S	S																			T	T	T	T	T			S					S		B	T	T	T	B
Template Predicted Secondary structure										.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.							.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		262	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	L	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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