Job Description P0A6D5 Confidence 100.00% Date Thu Jan 5 11:02:53 GMT 2012 Rank 12 Aligned Residues 258 % Identity 31% Template c2o7qA_ PDB info PDB header:oxidoreductase,transferase Chain: A: PDB Molecule:bifunctional 3-dehydroquinate dehydratase/shikimate PDBTitle: crystal structure of the a. thaliana dhq-dehydroshikimate-sdh-2 shikimate-nadp(h) Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	V	T	A	K	Y	E	L	I	G	L	M	A	Y	P	I	R	H	S	L	S	P	E	M	Q	N	K	A	L	E	K	A	G	L	P	F	T	Y	M	A	F	E	V	D	N	D	S	F	P	G	A	I	E	G	L	K	A	L	K	M	R	G	T	G	V	S	M	P	N	K	Q	L	A	C	E	Y	V	D	E
Query Conservation
Alig confidence																																														.	.																															.
Template Conservation																																														.	.																															.
Template Sequence		R	R	I	G	P	D	T	K	V	Y	G	I	I	G	K	P	V	S	H	S	K	S	P	I	V	H	N	Q	A	F	K	S	V	D	F	N	G	V	Y	V	H	L	L	V	.	.	D	N	L	V	S	F	L	Q	A	Y	S	S	S	D	F	A	G	F	S	C	T	I	P	H	K	E	A	A	L	Q	.	C	D	E
Template Known Secondary structure		G	G			T	T									S	S		T	T														T	T		S									.	.	S									T		S	T	T								T	T	S							.
Template Predicted Secondary structure																																														.	.																															.
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360			.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390		.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		L	T	P	A	A	K	L	V	G	A	I	N	T	I	V	N	D	.	.	D	G	Y	L	R	G	Y	N	T	D	G	T	G	H	I	R	A	I	K	E	S	G	F	D	I	K	G	K	T	M	V	L	L	G	A	G	G	A	S	T	A	I	G	A	Q	G	A	I	E	G	L	K	E	I	K	L	F	N	R	R	D
Query Conservation																			.	.
Alig confidence																			.	.																				.	.	.	.	.	.	.																									.	.									.
Template Conservation																																								.	.	.	.	.	.	.																									.	.									.
Template Sequence		V	D	P	L	A	K	S	I	G	A	V	N	T	I	L	R	R	K	S	D	G	K	L	L	G	Y	N	T	D	I	G	S	I	S	A	I	E	D	.	.	.	.	.	.	.	G	L	T	V	V	V	I	G	A	G	G	A	G	K	A	L	A	Y	G	A	K	E	K	A	.	.	K	V	V	I	A	N	R	T	.
Template Known Secondary structure										T			S						T	T	T																			.	.	.	.	.	.	.										S												T			.	.							S	S	.
Template Predicted Secondary structure																																								.	.	.	.	.	.	.																									.	.									.
Template SS confidence
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.								.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.			.	.	.	460	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	F	F	D	K	A	L	A	F	A	Q	R	V	N	E	N	T	D	C	V	V	T	V	T	D	L	A	D	Q	Q	A	F	A	E	A	L	A	S	A	D	I	L	T	N	G	T	K	V	G	M	K	P	L	E	N	E	S	L	V	N	D	I	S	L	L	H	P	G	L	L	V	T	E	C	V	Y	N	P	H	M
Query Conservation
Alig confidence		.	.																											.	.	.	.	.	.	.	.	.	.																						.
Template Conservation		.	.																											.	.	.	.	.	.	.	.	.	.																						.
Template Sequence		.	.	Y	E	R	A	L	E	L	A	E	A	I	G	G	K	A	L	S	L	T	D	L	D	N	Y	E	D	.	.	.	.	.	.	.	.	.	.	G	M	V	L	A	N	T	T	S	M	G	M	Q	P	N	V	E	E	T	P	I	.	S	K	D	A	L	K	H	Y	A	L	V	F	D	A	V	Y	T	P	R	I
Template Known Secondary structure		.	.									T	T	T	T						G	G	G	T	T					.	.	.	.	.	.	.	.	.	.	S							S	S	T	T		T	T		T	T			S	S	.		G	G	G	G	G	G										S	S	S	S
Template Predicted Secondary structure		.	.																											.	.	.	.	.	.	.	.	.	.																						.
Template SS confidence
				486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.											.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.		.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	K	L	L	Q	Q	A	Q	Q	A	G	C	K	T	I	D	G	Y	G	M	L	L	W	Q	G	A	E	Q	F	T	L	W	T	G	K	D	F	P	L	E	Y	V	K	Q	V	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	R	L	L	R	E	A	E	E	S	G	A	I	T	V	S	G	S	E	M	F	V	R	Q	A	Y	E	Q	F	E	I	F	T	G	L	P	A	P	K	E	L	Y	W	Q	I	M
Template Known Secondary structure										T	T	T																								S
Template Predicted Secondary structure
Template SS confidence
		555	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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