Job Description P0A6D5 Confidence 100.00% Date Thu Jan 5 11:02:53 GMT 2012 Rank 4 Aligned Residues 263 % Identity 35% Template c2hk8B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase from aquifex2 aeolicus at 2.35 angstrom resolution Resolution 2.35 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	A	K	Y	E	L	I	G	L	M	A	Y	P	I	R	H	S	L	S	P	E	M	Q	N	K	A	L	E	K	A	G	L	P	F	T	Y	M	A	F	E	V	D	N	D	S	F	P	G	A	I	E	G	L	K	A	L	K	M	R	G	T	G	V	S	M	P	N	K	Q	L	A	C	E	Y	V	D	E	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	N	A	Q	T	Q	L	Y	G	V	I	G	F	P	V	K	H	S	L	S	P	V	F	Q	N	A	L	I	R	Y	A	G	L	N	A	V	Y	L	A	F	E	I	N	P	E	E	L	K	K	A	F	E	G	F	K	A	L	K	V	K	G	I	N	V	T	V	P	F	K	E	E	I	I	P	L	L	D	Y	V	E
Template Known Secondary structure				T	T									S	S		T	T		S													T		S										G	G	G											T	T								T	T		T	T	T	T	G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	A	K	L	V	G	A	I	N	T	I	V	N	D	D	G	Y	L	R	G	Y	N	T	D	G	T	G	H	I	R	A	I	K	E	S	G	F	D	I	K	G	K	T	M	V	L	L	G	A	G	G	A	S	T	A	I	G	A	Q	G	A	I	E	G	L	K	E	I	K	L	F	N	R	R	D	E	F	F	D
Query Conservation
Alig confidence																																																																				.
Template Conservation																																																																				.
Template Sequence		D	T	A	K	E	I	G	A	V	N	T	V	K	F	E	N	G	K	A	Y	G	Y	N	T	D	W	I	G	F	L	K	S	L	K	S	L	I	P	E	V	K	E	K	S	I	L	V	L	G	A	G	G	A	S	R	A	V	I	Y	A	L	V	K	E	G	A	.	K	V	F	L	W	N	R	T	K	E	K	A	I
Template Known Secondary structure								T									T	T																	T	T	T		S			T	T									S													T	T		.							S	S
Template Predicted Secondary structure																																																																				.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	L	A	F	A	Q	R	V	N	E	N	T	D	C	V	V	T	V	T	D	L	A	D	Q	Q	A	F	A	E	A	L	A	S	A	D	I	L	T	N	G	T	K	V	G	M	K	P	L	E	N	E	S	L	V	N	D	I	S	L	L	H	P	G	L	L	V	T	E	C	V	Y	N	P	H	M	T	K	L	L
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.																						.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.																						.	.
Template Sequence		K	L	A	Q	K	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	E	V	V	N	S	P	E	E	V	I	D	K	V	Q	V	I	V	N	T	T	S	V	G	L	K	D	E	D	P	.	.	E	I	F	N	Y	D	L	I	K	K	D	H	V	V	V	D	I	I	Y	K	E	.	.	T	K	L	L
Template Known Secondary structure							S	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S		G	G	G	T	G	G	G		S						S	S	T	T	S	S	T	T			.	.		S	S		G	G	G			T	T							S	S	S		.	.
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.																						.	.
Template SS confidence
		161	.	.	.	.	.															.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.			.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.			.	220	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	A	Q	Q	A	G	C	K	T	I	D	G	Y	G	M	L	L	W	Q	G	A	E	Q	F	T	L	W	T	G	K	D	F	P	L	E	Y	V	K	Q	V	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	K	A	K	E	K	G	A	K	L	L	D	G	L	P	M	L	L	W	Q	G	I	E	A	F	K	I	W	N	G	C	E	V	P	Y	S	V	A	E	R	S	V
Template Known Secondary structure							T	T						S																	S
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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