Job Description P0A6D5 Confidence 100.00% Date Thu Jan 5 11:02:53 GMT 2012 Rank 13 Aligned Residues 256 % Identity 33% Template c2ev9B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: crystal structure of shikimate 5-dehydrogenase (aroe) from thermus2 thermophilus hb8 in complex with nadp(h) and shikimate Resolution 1.90 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	I	G	L	M	A	Y	P	I	R	H	S	L	S	P	E	M	Q	N	K	A	L	E	K	A	G	L	P	F	T	Y	M	A	F	E	V	D	N	D	S	F	P	G	A	I	E	G	L	K	A	L	K	M	R	G	T	G	V	S	M	P	N	K	Q	L	A	C	E	Y	V	D	E	L	T	P	A	A	K	L
Query Conservation
Alig confidence																																																					.
Template Conservation																																																					.
Template Sequence		L	R	F	A	V	L	G	H	P	V	A	H	S	L	S	P	A	M	H	A	F	A	L	E	S	L	G	L	E	G	S	Y	E	A	W	D	T	P	L	E	A	L	P	G	R	L	K	E	V	R	R	.	A	F	R	G	V	N	L	T	L	P	L	K	E	A	A	L	A	H	L	D	W	V	S	P	E	A	Q	R
Template Known Secondary structure									S	S		T	T		S												T	T												G	G	G											.			S						T	T	S	S	S	T	T	G	G	G	S	S
Template Predicted Secondary structure																																																					.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	A	I	N	T	I	V	N	D	D	G	Y	L	R	G	Y	N	T	D	G	T	G	H	I	R	A	I	K	E	S	G	F	D	I	K	G	K	T	M	V	L	L	G	A	G	G	A	S	T	A	I	G	A	Q	G	A	I	E	G	L	K	E	I	K	L	F	N	R	R	D	E	F	F	D	K	A	L	A	F
Query Conservation
Alig confidence																																								.																							.									.	.	.
Template Conservation																																								.																							.									.	.	.
Template Sequence		I	G	A	V	N	T	V	L	Q	V	E	G	R	L	F	G	F	N	T	D	A	P	G	F	L	E	A	L	K	A	G	G	I	P	L	K	G	P	.	A	L	V	L	G	A	G	G	A	G	R	A	V	A	F	A	L	R	E	A	G	L	.	E	V	W	V	W	N	R	T	.	.	.	P	Q	R	A	L	A	L
Template Known Secondary structure			T									T	T																			T	T					S		.							S													T	T		.							S	S	.	.	.
Template Predicted Secondary structure																																								.																							.									.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.				.	150	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	R	V	N	E	N	T	D	C	V	V	T	V	T	D	L	A	D	Q	Q	A	F	A	E	A	L	A	S	A	D	I	L	T	N	G	T	K	V	G	M	K	P	L	E	N	E	S	L	V	N	D	I	S	L	L	H	P	G	L	L	V	T	E	C	V	Y	N	P	H	M	T	K	L	L	Q	Q	A	Q	Q
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Sequence		A	E	E	F	G	L	R	A	V	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	A	R	E	A	R	L	L	V	N	A	T	R	V	G	L	E	.	.	D	P	S	A	S	P	L	P	A	E	L	F	P	E	E	G	A	A	V	D	L	V	Y	R	P	L	W	T	R	F	L	R	E	A	K	A
Template Known Secondary structure						T						G	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	G	G		S						S	S	T	T	T	T	.	.		T	T			S	S		G	G	G			S	S						S			S	S	S	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.														.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.			.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	C	K	T	I	D	G	Y	G	M	L	L	W	Q	G	A	E	Q	F	T	L	W	T	G	K	D	F	P	L	E	Y	V	K	Q	V	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	G	L	K	V	Q	T	G	L	P	M	L	A	W	Q	G	A	L	A	F	R	L	W	T	G	L	L	P	D	P	S	G	M	E	E	A	A
Template Known Secondary structure		T	T						S																	S
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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