Job Description P0A6D5 Confidence 100.00% Date Thu Jan 5 11:02:53 GMT 2012 Rank 5 Aligned Residues 270 % Identity 34% Template c2eggA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: crystal structure of shikimate 5-dehydrogenase (aroe) from2 geobacillus kaustophilus Resolution 2.25 Å

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		5	.		.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		A	K	.	Y	E	L	I	G	L	M	A	Y	P	I	R	H	S	L	S	P	E	M	Q	N	K	A	L	E	K	A	G	L	P	F	T	Y	M	A	F	E	V	D	N	D	S	F	P	G	A	I	E	G	L	K	A	L	K	M	R	G	T	G	V	S	M	P	N	K	Q	L	A	C	E	Y	V	D	E	L	T	P
Query Conservation				.
Alig confidence				.
Template Conservation
Template Sequence		G	H	M	E	K	V	Y	G	L	I	G	F	P	V	E	H	S	L	S	P	L	M	H	N	D	A	F	A	R	L	G	I	P	A	R	Y	H	L	F	S	V	E	P	G	Q	V	G	A	A	I	A	G	V	R	A	L	G	I	A	G	V	N	V	T	I	P	H	K	L	A	V	I	P	F	L	D	E	V	D	E
Template Known Secondary structure													S	S		T	T		S												T	T												T	T													T								T	T		T	T	T	T	G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		A	A	K	L	V	G	A	I	N	T	I	V	N	D	D	G	Y	L	R	G	Y	N	T	D	G	T	G	H	I	R	A	I	K	E	S	.	G	F	D	I	K	G	K	T	M	V	L	L	G	A	G	G	A	S	T	A	I	G	A	Q	G	A	I	E	G	L	K	E	I	K	L	F	N	R	R	D	E	F	F	D
Query Conservation																																					.
Alig confidence																																					.
Template Conservation
Template Sequence		H	A	R	R	I	G	A	V	N	T	I	I	N	N	D	G	R	L	V	G	Y	N	T	D	G	L	G	Y	V	Q	A	L	E	E	E	M	N	I	T	L	D	G	K	R	I	L	V	I	G	A	G	G	G	A	R	G	I	Y	F	S	L	L	S	T	A	A	E	R	I	D	M	A	N	R	T	V	E	K	A	E
Template Known Secondary structure							T									T	T																				T	T				T	T									S												T	T	T		S							S	S
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	L	A	F	A	Q	R	V	N	E	N	T	D	C	V	V	T	V	T	D	L	A	D	Q	Q	A	F	A	E	A	L	A	S	A	D	I	L	T	N	G	T	K	V	G	M	K	P	L	E	N	E	S	L	V	N	D	I	S	L	L	H	P	G	L	L	V	T	E	C	V	Y	N	P	H	M	T	K	L	L
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.																																					.
Template Conservation												.	.	.	.	.	.	.	.	.																																					.
Template Sequence		R	L	V	R	E	G	D	E	R	R	.	.	.	.	.	.	.	.	.	S	A	Y	F	S	L	A	E	A	E	T	R	L	A	E	Y	D	I	I	I	N	T	T	S	V	G	M	H	P	R	V	E	V	Q	P	L	.	S	L	E	R	L	R	P	G	V	I	V	S	D	I	I	Y	N	P	L	E	T	K	W	L
Template Known Secondary structure							S		S	S	S	.	.	.	.	.	.	.	.	.												T	G	G	G		S						S		T	T		S	S			S			S	S	.			T	T			T	T									S	S	S	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.																																					.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.										190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	A	Q	Q	A	G	C	K	T	I	D	G	Y	G	M	L	L	W	Q	G	A	E	Q	F	T	L	W	T	G	K	D	F	P	L	E	Y	V	K	Q	V	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	E	A	K	A	R	G	A	R	V	Q	N	G	V	G	M	L	V	Y	Q	G	A	L	A	F	E	K	W	T	G	Q	W	P	D	V	N	R	M	K	Q	L	V
Template Known Secondary structure							T	T						S																	S
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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