Job Description P0A6D5 Confidence 100.00% Date Thu Jan 5 11:02:53 GMT 2012 Rank 14 Aligned Residues 257 % Identity 27% Template c1p74B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate 5-dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase (aroe) from2 haemophilus influenzae Resolution 2.40 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	I	G	L	M	A	Y	P	I	R	H	S	L	S	P	E	M	Q	N	K	A	L	E	K	A	G	L	P	F	T	Y	M	A	F	E	V	D	N	D	S	F	P	G	A	I	E	G	L	K	A	L	K	M	R	G	T	G	V	S	M	P	N	K	Q	L	A	C	E	Y	V	D	E	L	T	P	A	A	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	Y	A	V	W	G	N	P	I	A	Q	S	K	S	P	L	I	Q	N	K	L	A	A	Q	T	H	Q	T	M	E	Y	I	A	K	L	G	D	L	D	A	F	E	Q	Q	L	L	A	F	F	E	E	G	A	K	G	C	N	I	T	S	P	F	K	E	R	A	Y	Q	L	A	D	E	Y	S	Q	R	A	K	L
Template Known Secondary structure									S	S		T	T														T	T												T	T	T											T	T								T	T							T	T		S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		88	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		V	G	A	I	N	T	I	V	N	.	D	D	G	Y	L	R	G	Y	N	T	D	G	T	G	H	I	R	A	I	K	E	S	G	F	D	I	K	G	K	T	M	V	L	L	G	A	G	G	A	S	T	A	I	G	A	Q	G	A	I	E	G	L	K	E	I	K	L	F	N	R	R	D	E	F	F	D	K	A	L	A
Query Conservation											.
Alig confidence											.																																																				.
Template Conservation																																																															.
Template Sequence		A	E	A	C	N	T	L	K	K	L	D	D	G	K	L	Y	A	D	N	T	D	G	I	G	L	V	T	D	L	Q	R	L	N	W	L	R	P	N	Q	H	V	L	I	L	G	A	G	G	A	T	K	G	V	L	L	P	L	L	Q	A	Q	.	Q	N	I	V	L	A	N	R	T	F	S	K	T	K	E	L	A	E
Template Known Secondary structure			T			S						S	S	S																			T	T				T	T								S	S	T	T	T	T	T	T							T	T	.								S	S
Template Predicted Secondary structure																																																															.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		F	A	Q	R	V	N	E	N	T	D	C	V	V	T	V	T	D	L	A	D	Q	Q	A	F	A	E	A	L	A	S	A	D	I	L	T	N	G	T	K	V	G	M	K	P	L	E	N	E	S	L	V	N	D	I	S	L	L	H	P	G	L	L	V	T	E	C	V	Y	N	P	.	H	M	T	K	L	L	Q	Q	A
Query Conservation																																																																								.
Alig confidence								.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.																				.
Template Conservation								.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Template Sequence		R	F	Q	P	Y	G	.	.	.	.	.	.	.	.	.	.	N	I	Q	A	V	S	M	D	S	I	P	L	Q	T	Y	D	L	V	I	N	A	T	S	A	A	S	.	.	.	.	.	.	.	.	.	V	D	A	E	I	L	K	L	G	S	A	F	Y	D	M	Q	Y	A	K	G	T	D	T	P	F	I	A	L	C
Template Known Secondary structure				G	G	G	S	.	.	.	.	.	.	.	.	.	.							G	G	G				S		B	S											.	.	.	.	.	.	.	.	.							T	T	B	S					S				S	S	S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.											.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.										.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		246	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		Q	Q	A	G	C	.	K	T	I	D	G	Y	G	M	L	L	W	Q	G	A	E	Q	F	T	L	W	T	G	K	D	F	P	L	E	Y	V	K	Q	V	M
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		K	S	L	G	L	T	N	V	S	D	G	F	G	M	L	V	A	Q	A	A	H	S	F	H	L	W	R	G	V	M	P	D	F	V	S	V	Y	E	Q	L
Template Known Secondary structure				T	T							S																	S
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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