Job Description P0A6D5 Confidence 100.00% Date Thu Jan 5 11:02:53 GMT 2012 Rank 9 Aligned Residues 263 % Identity 30% Template c1npyA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical shikimate 5-dehydrogenase-like PDBTitle: structure of shikimate 5-dehydrogenase-like protein hi0607 Resolution 1.75 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		V	T	A	K	Y	E	L	.	I	G	L	M	A	Y	P	I	R	H	S	L	S	P	E	M	Q	N	K	A	L	E	K	A	G	L	P	F	T	Y	M	A	F	E	V	D	N	D	S	F	P	G	A	I	E	G	L	K	A	L	K	M	R	G	T	G	V	S	M	P	N	K	Q	L	A	C	E	Y	V	D	E	L
Query Conservation									.
Alig confidence									.								.	.																											.	.
Template Conservation																	.	.																											.	.
Template Sequence		I	N	K	D	T	Q	L	C	M	S	L	S	G	R	P	.	.	S	N	F	G	T	T	F	H	N	Y	L	Y	D	K	L	G	L	N	F	I	Y	K	A	F	T	T	.	.	Q	D	I	E	H	A	I	K	G	V	R	A	L	G	I	R	G	C	A	V	S	M	P	F	K	E	T	C	M	P	F	L	D	E	I
Template Known Secondary structure				T	T									S	S		.	.		S														T											.	.	S													T								T	T		T	T	T	T	G	G	G		S
Template Predicted Secondary structure																	.	.																											.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	A	A	K	L	V	G	A	I	N	T	I	V	N	D	D	G	Y	L	R	G	Y	N	T	D	G	T	G	H	I	R	A	I	K	E	S	G	F	D	I	K	G	K	T	M	V	L	L	G	A	G	G	A	S	T	A	I	G	A	Q	G	A	I	E	G	L	K	E	I	K	L	F	N	R	R	D	E	F	F
Query Conservation
Alig confidence																																										.
Template Conservation																																										.
Template Sequence		H	P	S	A	Q	A	I	E	S	V	N	T	I	V	N	D	N	G	F	L	R	A	Y	N	T	D	Y	I	A	I	V	K	L	I	E	K	Y	H	L	N	.	K	N	A	K	V	I	V	H	G	S	G	G	M	A	K	A	V	V	A	A	F	K	N	S	G	F	E	K	L	K	I	Y	A	R	N	V	K	T	G
Template Known Secondary structure							T	T	T									T	T																			T	T			.	T	T	S							S	S	T	T											T	T									S
Template Predicted Secondary structure																																										.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		D	K	A	L	A	F	A	Q	R	V	N	E	N	T	D	C	V	V	T	V	T	D	L	A	D	Q	Q	A	F	A	E	A	L	A	S	A	D	I	L	T	N	G	T	K	V	G	M	K	P	L	E	N	E	S	L	V	N	.	D	I	S	L	L	H	P	G	L	L	V	T	E	C	V	Y	N	P	H	M	T	K
Query Conservation																																																											.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	Y	L	A	A	L	Y	G	Y	A	Y	I	N	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	N	Q	Q	A	D	I	L	V	N	V	T	S	I	G	M	K	G	G	K	E	E	M	D	L	A	F	P	K	A	F	I	D	N	A	S	V	A	F	D	V	V	A	M	P	V	E	T	P
Template Known Secondary structure									T					S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T				S						S	S	T	T		T	T	S	T	T	T	T	S		S	S									S								S	S	S	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170																	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	Q	Q	A	Q	Q	A	G	C	K	T	I	D	G	Y	G	M	L	L	W	Q	G	A	E	Q	F	T	L	W	T	G	K	D	F	P	L	E	Y	V	K	Q	V	M	G	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	I	R	Y	A	Q	A	R	G	K	Q	T	I	S	G	A	A	V	I	V	L	Q	A	V	E	Q	F	E	L	Y	T	H	Q	R	P	S	D	E	L	I	A	E	A	A	A	F
Template Known Secondary structure									T	T																							S
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions