Job Description P0A6D5 Confidence 100.00% Date Thu Jan 5 11:02:53 GMT 2012 Rank 28 Aligned Residues 252 % Identity 20% Template c1luaA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:methylene tetrahydromethanopterin dehydrogenase; PDBTitle: structure of methylene-tetrahydromethanopterin dehydrogenase from2 methylobacterium extorquens am1 complexed with nadp Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.						.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.																								.	.
Query SS confidence																					.	.	.	.	.																								.	.
Query Sequence		Y	P	I	R	H	S	L	S	P	E	M	Q	N	K	A	L	E	K	A	.	.	.	.	.	G	L	P	F	T	Y	M	A	F	E	V	D	N	D	S	F	P	G	A	I	E	G	L	.	.	K	A	L	K	M	R	G	T	G	V	S	M	P	N	K	Q	L	A	C	E	Y	V	D	E	L	T	P	A	A	K	L
Query Conservation																					.	.	.	.	.																								.	.
Alig confidence																					.	.	.	.	.																								.	.
Template Conservation
Template Sequence		K	K	L	L	F	Q	F	D	T	D	A	T	P	S	V	F	D	V	V	V	G	Y	D	G	G	A	D	H	I	T	G	Y	G	N	V	T	P	D	N	V	G	A	Y	V	D	G	T	I	Y	T	R	G	G	K	E	K	Q	S	T	A	I	F	V	G	G	G	D	M	A	A	G	E	R	V	F	E	A	V	K	K
Template Known Secondary structure										S	S	S	S												T	T		S						S	S			T	T	T										S	S			G	G	G	G	G	G								S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																	.														.
Query SS confidence																																	.														.
Query Sequence		V	G	A	I	N	T	I	V	N	D	D	G	Y	L	R	G	Y	N	T	D	G	T	G	H	I	R	A	I	K	E	S	.	G	F	D	I	K	G	K	T	M	V	L	L	G	.	A	G	G	A	S	T	A	I	G	A	Q	G	A	I	E	G	L	K	E	I	K	L	F	N	R	R	D	E	F	F	D	K	A	L
Query Conservation																																	.														.
Alig confidence																																	.														.																		.									.	.	.
Template Conservation																																																																	.									.	.	.
Template Sequence		R	F	F	G	P	F	R	V	S	C	M	L	D	S	N	G	S	N	T	T	A	A	A	G	V	A	L	V	V	K	A	A	G	G	S	V	K	G	K	K	A	V	V	L	A	G	T	G	P	V	G	M	R	S	A	A	L	L	A	G	E	G	A	.	E	V	V	L	C	G	R	K	.	.	.	L	D	K	A	Q
Template Known Secondary structure				B	T	T	B								G	G	G																T	T	S			T	T							T	T	T	S													T	T		.							S	S	.	.	.
Template Predicted Secondary structure																																																																	.									.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.				.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		A	F	A	Q	R	V	N	E	N	T	D	C	V	V	T	V	T	D	L	A	D	Q	Q	A	F	A	E	A	L	A	S	A	D	I	L	T	N	G	T	K	V	G	M	K	P	L	E	N	E	S	L	V	N	D	I	S	L	L	H	P	G	L	L	V	T	E	C	V	Y	N	P	H	M	T	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence																																																			.	.	.	.																						.	.	.	.	.	.
Template Conservation																																																			.	.	.	.
Template Sequence		A	A	A	D	S	V	N	K	R	F	K	V	N	V	T	A	A	E	T	A	D	D	A	S	R	A	E	A	V	K	G	A	H	F	V	F	T	A	G	A	I	G	L	E	L	L	P	Q	A	.	.	.	.	A	W	Q	N	E	S	S	I	E	I	V	A	D	Y	N	A	Q	P	P	L	G	I	G	G	I	D	A
Template Known Secondary structure												T										S								T	T	T		S								T	T				B				.	.	.	.				T		T	T										S	S	S		S	B	T	T			T
Template Predicted Secondary structure																																																			.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.					.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
						240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	K	L	L	Q	Q	A	Q	Q	A	G	C	K	T	I	D	G	Y	G	M	L	L	W	Q	G	A	E	Q	F	T	L	W	T	G	K	D	F
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.																												.
Template Conservation																																	.
Template Sequence		T	D	K	G	K	E	Y	G	G	K	R	A	F	G	A	L	G	I	G	G	L	K	L	K	L	H	R	A	C	I	A	.	K	L	F	E	S	S	E	G
Template Known Secondary structure		T							T	T																							.			T	S		S
Template Predicted Secondary structure																																	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions