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Job DescriptionP02918
Confidence100.00%DateThu Jan 5 10:57:34 GMT 2012
Rank10Aligned Residues369
% Identity23%Templated2olua2
SCOP infobeta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase
Resolution2.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   256...260.........270....... ..280.........290.........300.........310.........320.........
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Query Sequence  EIAFSAPYLSEMVRQEMYNRYG. . . . . . ESAYEDGYRIYTTITRKVQQAAQQAVRNNVLDYDMRHGYRGPANVLWKVGES
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Template Sequence  NQDSEYNSYVNFVKSELXNNKAFKDENLGNVLQSGIKIYTNXDKDVQKTLQNDVDNGSFYKNK. . . . . . . . . . . . . . . . .
Template Known Secondary structure 

SGGGTTSTTTTTS
TTS





S

SST.................
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   294.....300.........310.........320.........330.........340.........350......
 
   330.........340.........350.........360.........370.........380.........390.........400.........
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Query Sequence  AWDNNKITDTLKALPTYGPLLPAAVTSANPQQATAMLADGSTVALSMEGVRWARPYRSDTQQGPTPRKVTDVLQTGQQIW
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   410.........420.........430.........440.........450.........460.........470. ........ 480.......
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Query Sequence  VRQVGDAWWLAQVPEVNSALVSINPQNGAVMALVGGFDFNQSKFNRATQALRQVGSNIKPFL. YTAAMDKG. LTLASMLN
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Template Sequence  . . . . . . . . . . . . . . DQQVGATILDSKTGGLVAISGGRDFKDVVNRNQATDPHPTGSSLKPFLAYGPAIENXKWATNHAIQ
Template Known Secondary structure  ..............TTTT
B
STT

TTTS

TTTS

GGGGTT


TTB
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   357..360.........370.........380.........390.........400.........410.........420..
 
   488.490.........500.........510.........520.........530.........540.........550... ......560....
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Query Sequence  DVPISRWDASAGSDWQPKNSPPQYAGPIRLRQGLGQSKNVVMVRAMRAMGVDYAAEYLQRFGFPAQ. . . NIVHTESLALG
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Template Sequence  DESSYQVDG. . . . . STFRNYDTKSHGTVSIYDALRQSFNIPALKAWQSVKQNAGNDAPKKFAAKLGLNYEGDIGPSEVLG
Template Known Secondary structure 

SSTT.....

TTS



TT
T
TTTT


SS


TT
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   423......430. ........440.........450.........460.........470.........480.........490.......
 
   565....570.........580.........590.........600.........610.........620.........630.........640..
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Query Sequence  . . SASFTPMQVARGYAVMANGGFLVDPWFISKIENDQGGVIFEAKPKVACPECDIPVIYGDTQKSNVLENNDVEDVAISR
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Template Sequence  GSASEFSPTQLASAFAAIANGGTYNNAHSIQKVVTRDGETIEYDH. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 
TT

TTS

B

TTS



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   498.500.........510.........520.........530.........540..
 
   643......650.........660.........670.........680.........690.........700.........710.........720
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Query Sequence  EQQNVSVPMPQLEQANQALVAKTGAQEYAPHVINTPLAFLIKSALNTNIFGEPGWQGTGWRAGRDLQRRDIGGKTGTT. .
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . TSHKAXSDYTAYXLAEXLKGTFKPY. . . . GSAYGH. . GVSGVNXGAKTGTGTY
Template Known Secondary structure  ...........................

S
GGGSTT....STTTT
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SS




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   543......550.........560....... ..570... ......580.........
 
   721........730.........740.........750.........760.........770.........780........
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Query Sequence  . . . . . . . . . . . . NSSKDAWFSGYGPGVVTSVWIGFDDHRRNLGHTTASGAIKDQISGYEGGAKSAQPAWDAYMKAVLEGV
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Template Sequence  GAETYSQYNLPDNAAKDVWINGFTPQYTXSVWXGFSKVK. . . . . . . . . . QYGENSFVGHSQQEYPQFLYENVXSKI. SSR
Template Known Secondary structure 
TT

TTS
SSSS

..........GGGTTSST.S

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   590.........600.........610.........620........ .630.........640.........650..... ...
 
   789790.........800 .........810.........
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Query Sequence  PEQPLTPPPGIV. TVNIDRSTGQLANGGNSRE
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Template Sequence  DGEDFKRPSSVSGSIPSINVSGSQDNNTTNRS
Template Known Secondary structure  S






TTS
TT

TT


SSB



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   659660.........670.........680.........690
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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