Job Description P02918 Confidence 100.00% Date Thu Jan 5 10:57:34 GMT 2012 Rank 15 Aligned Residues 198 % Identity 38% Template d2olua1 SCOP info Lysozyme-like Lysozyme-like PBP transglycosylase domain-like Resolution 2.90

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		V	R	L	Q	I	P	M	Q	I	Y	S	A	D	G	E	L	I	A	Q	Y	G	E	.	K	R	R	I	P	V	T	L	D	Q	I	P	P	E	M	V	K	A	F	I	A	T	E	D	S	R	F	Y	E	H	H	G	V	D	P	V	G	I	F	R	A	A	S	V	A	L	F	S	G	H	A	S	Q	G	A	S	T
Query Conservation																								.
Alig confidence																								.																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	Q	D	P	I	P	A	K	I	Y	D	K	N	G	E	L	V	K	T	L	D	N	G	Q	R	H	E	H	V	N	L	K	D	V	P	K	S	X	K	D	A	V	L	A	T	E	D	N	R	F	Y	E	H	G	A	L	D	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	G	S	E	G	A	S	T
Template Known Secondary structure													T	T									T	T								G	G	G	S														T	T	T	T	T			G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T	T	T	S
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.														.	.	.	130	.	.	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	Q	Q	L	A	R	N	F	F	L	S	P	E	R	T	L	M	R	K	I	K	E	V	F	L	A	I	R	I	E	Q	L	L	T	K	D	E	I	L	E	L	Y	L	N	K	I	Y	L	G	Y	R	A	Y	G	V	G	A	A	A	Q	V	Y	F	G	K	T	V	D	Q	L	T	L	N	E	M	A	V	I	A
Query Conservation
Alig confidence												.	.	.	.
Template Conservation												.	.	.	.
Template Sequence		L	T	Q	Q	V	V	K	D	A	F	.	.	.	.	L	S	I	G	R	K	A	Q	E	A	Y	L	S	Y	R	L	E	Q	E	Y	S	K	D	D	I	F	Q	V	Y	L	N	K	I	Y	Y	S	D	G	V	T	G	I	K	A	A	A	K	Y	Y	F	N	K	D	L	K	D	L	N	L	A	E	E	A	Y	L	A
Template Known Secondary structure										T	T	.	.	.	.					T	T														S														B		S	T	T			S										S			G	G	G
Template Predicted Secondary structure												.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.					.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	P	K	A	P	S	T	F	N	P	L	Y	S	M	D	R	A	V	A	R	R	N	V	V	L	S	R	M	L	D	E	G	Y	I	T	Q	Q	Q	F	D	Q	T	R	T	E	A	I	N	A	N	Y	H	A	P	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	P	Q	V	P	N	N	Y	N	I	Y	D	H	P	K	A	A	E	D	R	K	N	T	V	L	Y	L	X	H	Y	H	K	R	I	T	D	K	Q	W	E	D	A	K	K	I	D	L	K	A	N	L	V	N	R	T
Template Known Secondary structure			G	G	G	S	T	T	T	S		T	T	T																			T	T	S	S										T	S		G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions