Job Description P02918 Confidence 99.77% Date Thu Jan 5 10:57:34 GMT 2012 Rank 43 Aligned Residues 228 % Identity 19% Template d2cc1a1 SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 2.13

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		426	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.				.	.	.		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.
Predicted Secondary structure																																																					.	.	.				.
Query SS confidence																																																					.	.	.				.
Query Sequence		N	S	A	L	V	S	I	N	P	Q	N	G	A	V	M	A	L	V	G	G	F	D	F	N	Q	S	K	F	N	R	A	T	Q	A	L	R	Q	V	G	S	N	I	K	P	F	L	Y	T	A	A	M	.	.	.	D	K	G	.	L	T	L	A	S	M	L	N	D	V	P	I	S	R	W	D	A	S	A	G	S	D
Query Conservation																																																					.	.	.				.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.				.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	I	G	L	Y	A	A	N	L	Q	S	G	R	R	I	T	H	R	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	E	M	F	A	M	C	S	T	F	K	G	Y	V	A	A	R	V	L	Q	M	A	E	H	G	E	I	S	L	D	N	R	V	F	V	D	A	D	A	L	V	P	N	S	P	V	T	E
Template Known Secondary structure										T	T	T							S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	S					G	G	G															T	T	S	S		T	T							G	G	G			S	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.														.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		502	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.		.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.							.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.
Predicted Secondary structure																																						.																					.	.	.	.	.	.
Query SS confidence																																						.																					.	.	.	.	.	.
Query Sequence		W	Q	P	K	N	S	P	P	Q	Y	A	G	P	I	R	L	R	Q	G	L	G	Q	S	K	N	V	V	M	V	R	A	M	R	A	M	G	.	V	D	Y	A	A	E	Y	L	Q	R	F	G	F	P	A	Q	N	I	V	H	.	.	.	.	.	.	T	E	S	L	A	L	G	S	A	S	F	T	P	M	Q	V	A
Query Conservation																																						.																					.	.	.	.	.	.
Alig confidence			.	.	.																																	.																					.	.	.	.	.	.
Template Conservation			.	.	.
Template Sequence		A	.	.	.	R	A	G	A	E	M	T	L	A	E	L	C	Q	A	A	L	Q	R	S	D	N	T	A	A	N	L	L	L	K	T	I	G	G	P	A	A	V	T	A	F	A	R	S	V	G	D	E	R	T	R	L	D	R	W	E	V	E	L	N	S	A	I	P	G	D	P	R	D	T	S	T	P	A	A	L	A
Template Known Secondary structure		T	.	.	.	T	T	T	S														S														T												T	T			S					S		T	T	G	G	G	G			T	T			T	T
Template Predicted Secondary structure			.	.	.
Template SS confidence
		111				.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		575	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	Y	A	V	M	A	N	G	G	F	L	V	D	P	W	F	I	S	K	I	E	N	D	Q	G	G	V	I	F	E	A	K	P	K	V	A	C	P	E	C	D	I	P	V	I	Y	G	D	T	Q	K	S	N	V	L	E	N	N	D	V	E	D	V	A	I	S	R	E	Q	Q	N	V	S	V	P	M	P	Q	L
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	G	Y	R	A	I	L	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.
		655	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720		.	.	.	.	.	.	.	.	.	730	.	.	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		E	Q	A	N	Q	A	L	V	A	K	T	G	A	Q	E	Y	A	P	H	V	I	N	T	P	L	A	F	L	I	K	S	A	L	N	T	N	I	F	G	E	P	G	W	Q	G	T	G	W	R	A	G	R	D	L	Q	R	R	D	I	G	G	K	T	G	T	T	.	N	S	S	K	D	A	W	F	S	G	Y	G	P
Query Conservation																																																																				.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.																									.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	L	S	P	P	Q	R	G	L	L	E	D	W	M	R	.	.	.	.	.	.	.	.	A	N	Q	T	S	S	M	R	A	G	L	P	E	G	W	T	T	A	D	K	T	G	S	G	D	Y	G	S	T	N	D	A	G	I	A	F	G	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S														.	.	.	.	.	.	.	.	T		S			S	G	G	G	G	S		T	T											S	T	T											T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Template SS confidence
																				197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.									.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		734				.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.
Predicted Secondary structure			.	.	.
Query SS confidence			.	.	.
Query Sequence		G	.	.	.	V	V	T	S	V	W	I	G	F	D	D	H	R	R	N	L	G	H	T	T	A	S	G	A	I	K	D	Q	I	S	G	Y	E	G	G	A	K	S	A	Q	P	A	W	D	A	Y	M	K	A	V	L	E
Query Conservation			.	.	.
Alig confidence			.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	G	Q	R	L	L	L	V	M	M	T	R	S	Q	A	H	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	K	A	E	N	L	R	P	L	I	G	E	L	T	A	L	V	L	P
Template Known Secondary structure		T	S												S	S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.																					.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions