Job Description P02918 Confidence 99.72% Date Thu Jan 5 10:57:34 GMT 2012 Rank 50 Aligned Residues 229 % Identity 14% Template d1m40a_ SCOP info beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase Resolution 0.85

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		426	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.				.		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.
Predicted Secondary structure																																																							.	.	.		.
Query SS confidence																																																							.	.	.		.
Query Sequence		N	S	A	L	V	S	I	N	P	Q	N	G	A	V	M	A	L	V	G	G	F	D	F	N	Q	S	K	F	N	R	A	T	Q	A	L	R	Q	V	G	S	N	I	K	P	F	L	Y	T	A	A	M	D	K	.	.	.	G	.	L	T	L	A	S	M	L	N	D	V	P	I	S	R	W	D	A	S	A	G	S	D
Query Conservation																																																							.	.	.		.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.		.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	V	G	Y	I	E	L	D	L	N	S	G	K	I	L	E	S	F	R	P	.	.	.	.	.	.	.	.	.	.	.	.	E	E	R	F	P	M	M	S	T	F	K	V	L	L	C	G	A	V	L	S	R	V	D	A	G	Q	E	Q	L	G	R	R	I	H	Y	S	Q	N	D	L	V	E	Y	S	P	V	T	E
Template Known Secondary structure										T	T	T								S	T	.	.	.	.	.	.	.	.	.	.	.	.	T	S					G	G	G															T	T	S			T	T							G	G	G			S			T	T	G	G
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.													.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		502	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.		.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.							.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.
Predicted Secondary structure																																					.																					.	.	.	.	.	.
Query SS confidence																																					.																					.	.	.	.	.	.
Query Sequence		W	Q	P	K	N	S	P	P	Q	Y	A	G	P	I	R	L	R	Q	G	L	G	Q	S	K	N	V	V	M	V	R	A	M	R	A	M	.	G	V	D	Y	A	A	E	Y	L	Q	R	F	G	F	P	A	Q	N	I	V	.	.	.	.	.	.	H	T	E	S	L	A	L	G	S	A	S	F	T	P	M	Q	V	A
Query Conservation																																					.																					.	.	.	.	.	.
Alig confidence					.	.	.																														.																					.	.	.	.	.	.
Template Conservation					.	.	.
Template Sequence		K	H	L	.	.	.	T	D	G	M	T	V	R	E	L	C	S	A	A	I	T	M	S	D	N	T	A	A	N	L	L	L	T	T	I	G	G	P	K	E	L	T	A	F	L	H	N	M	G	D	H	V	T	R	L	D	R	W	E	P	E	L	N	E	A	I	P	N	D	E	R	D	T	T	T	P	A	A	M	A
Template Known Secondary structure		G		T	.	.	.	T	T														S														T	S											T	T		S	S							T	T	G	G	G				T	T			T	T
Template Predicted Secondary structure					.	.	.
Template SS confidence
		111	.	.				.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		575	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	Y	A	V	M	A	N	G	G	F	L	V	D	P	W	F	I	S	K	I	E	N	D	Q	G	G	V	I	F	E	A	K	P	K	V	A	C	P	E	C	D	I	P	V	I	Y	G	D	T	Q	K	S	N	V	L	E	N	N	D	V	E	D	V	A	I	S	R	E	Q	Q	N	V	S	V	P	M	P	Q	L
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	T	L	R	K	L	L	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.
		655	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.			.	.	.	.	.	.	730	.	.
Predicted Secondary structure																																																																							.	.
Query SS confidence																																																																							.	.
Query Sequence		E	Q	A	N	Q	A	L	V	A	K	T	G	A	Q	E	Y	A	P	H	V	I	N	T	P	L	A	F	L	I	K	S	A	L	N	T	N	I	F	G	E	P	G	W	Q	G	T	G	W	R	A	G	R	D	L	Q	R	R	D	I	G	G	K	T	G	T	T	N	S	S	.	.	K	D	A	W	F	S	G	Y	G
Query Conservation																																																																							.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.												.																.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.												.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	L	T	L	A	S	R	Q	Q	L	I	D	W	M	E	A	D	K	.	.	.	.	.	V	A	G	P	L	L	R	S	A	L	P	.	A	G	W	F	I	A	D	K	S	G	A	G	E	R	G	S	R	G	I	I	A	A	L	G	P	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S																S	.	.	.	.	.	S		T	T	T	G	G	G	G			.	T	T											S	T	T										S	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.												.
Template SS confidence
																				197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.						.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
				733	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	P	G	V	V	T	S	V	W	I	G	F	D	D	H	R	R	N	L	G	H	T	T	A	S	G	A	I	K	D	Q	I	S	G	Y	E	G	G	A	K	S	A	Q	P	A	W	D	A	Y	M	K	A	V	L	E
Query Conservation		.	.
Alig confidence		.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	K	P	S	R	I	V	V	I	Y	T	T	G	S	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	M	D	E	R	N	R	Q	I	A	E	I	G	A	S	L	I	K
Template Known Secondary structure		T												S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270																							.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions