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Job DescriptionP02918
Confidence100.00%DateThu Jan 5 10:57:34 GMT 2012
Rank25Aligned Residues273
% Identity24%Templated1k25a4
SCOP infobeta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like beta-Lactamase/D-ala carboxypeptidase
Resolution3.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   290.........300.........310.........320.........330.........340.........350.........360.........
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Query Sequence  TITRKVQQAAQQAVRNNVLDYDMRHGYRGPANVLWKVGESAWDNNKITDTLKALPTYGPLLPAAVTSANPQQATAMLADG
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Template Sequence  TLSSPLQSFMETQMDAFLEKVKGK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   264.....270.........280.......
 
   370.........380.........390.........400.........410.........420.........430.........440.........
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Query Sequence  STVALSMEGVRWARPYRSDTQQGPTPRKVTDVLQTGQQIWVRQVGDAWWLAQVPEVNSALVSINPQNGAVMALVGGFDFN
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . YMTATLVSAKTGEILATTQRPTFN
Template Known Secondary structure  ........................................................TTTTS

B
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   288.290.........300.........310.
 
   450... ......460.........470......... 480.........490.........500.........510........
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Query Sequence  QSKF. . . . . . . . . . NRATQALRQVGSNIKPFLYTAAMDKG. LTLASMLNDVPISRWDASAGSDWQPKNSPPQYAGPIRLR
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Template Sequence  ADTKEGITEDFVWRDILYQSNYEPGSAMKVMTLASSIDNNTFPSGEYFNSSE. . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTTTBT

TT




TTTS

B

TTTTTT


SSSGGGGGG............................
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   312.......320.........330.........340.........350.........360...
 
   519520.........530.........540.........550......... 560.... .....570.........580.
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Query Sequence  QGLGQSKNVVMVRAMRAMGVDYAAEYLQRFGFPAQNIVHTE. . . . . . . . . . . . . . . . SLALG. SASFTPMQVARGYAVMA
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Template Sequence  . . . . LSSNVGMSLLEQKMGDATWLDYLKRFKFGVPTRFGLTDEYAGQLPADNIVSIAQSSFGQGISVTQTQMLRAFTAIA
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SSSTTTS



SSSS



B


SSTTTTSS
BB
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   364.....370.........380.........390.........400.........410.........420.........430.........
 
   582.......590.........600.........610.........620.........630.........640.........650.........660.
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Query Sequence  NGGFLVDPWFISKIENDQGGVIFEAKPKVACPECDIPVIYGDTQKSNVLENNDVEDVAISREQQNVSVPMPQLEQANQAL
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Template Sequence  NDGVMLEPKFISAIYDTNNQSVRKSQKEIV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTT


B


B

BTTTTB

B



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   470.........480.........490.........
 
   662.......670.........680.........690.........700.........710.........720 ........
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Query Sequence  VAKTGAQEYAPHVINTPLAFLIKSALNTNIFGEPGWQGTGWRAGRDLQRRDIGGKTGTT. . . . . . . . . . . . . NSSKDAWF
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Template Sequence  . . . . . . . . . . GNPVSKEAASTTRNHMILVG. . . . . TDPLII. . . . TVPGQNVAVKSGTAQIADEKNGGYLVGSTNYIFSA
Template Known Secondary structure  ..........

S
SSTT.....T




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TTS



B

BTTTBS


SSS
B
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   500.........510......... 520..... ....530.........540.........550.........560
 
   729730... ......740.........750.........760.........770.........780 .........790..
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Query Sequence  SGYGP. . . . GVVTSVWIGFDDHRRNLGHTTASGAIKDQISGYEGGAKSAQPAWDAY. . MKAVLEGVPEQP
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Template Sequence  VTMNPAENPDFILYVTVQQPEH. . . . . . . . . . . . . . . . . YSGIQLGEFATPILERASAMKESLNLQSPAK
Template Known Secondary structure  STTS
SS
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TTTT
SSS

T
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   573......580.........590.... .....600.........610.........620.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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