Return to main results Retrieve Phyre Job Id

Job DescriptionP02918
Confidence83.57%DateThu Jan 5 10:57:34 GMT 2012
Rank99Aligned Residues83
% Identity18%Templatec3tg9A_
PDB info PDB header:penicillin binding proteinChain: A: PDB Molecule:penicillin-binding protein; PDBTitle: the crystal structure of penicillin binding protein from bacillus2 halodurans
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   424.....430.........440.........450.........460.........470...... ... 480.........490.........
Predicted Secondary structure 


























...

.












Query SS confidence 




















































. . .


.



















Query Sequence  EVNSALVSINPQNGAVMALVGGFDFNQSKFNRATQALRQVGSNIKPFLYTAAM. . . DKG. LTLASMLNDVPISRWDASAG
Query Conservation    
 
 



  

 


 


        


 

 








  




...
 
. 
  
   
 
         
Alig confidence 
































.


















...


.








...........
Template Conservation     
   
   
 
      
 

     
 
 . 
 
 
 
 

  

  
  




 
 

 

  ...........
Template Sequence  KLSGTALMKKGEDIPFIASLGFANRAERIPNEH. HTRFGIASGCKLFTAIAICQLVEAGKLSFDTPLSD. . . . . . . . . . .
Template Known Secondary structure  T

TTS

STTTT

T.T
B
GGGGTS

TT
BGGG...........
Template Predicted Secondary structure 














.











...........
Template SS confidence 















































































   13......20.........30.........40..... ....50.........60.........70.........80
 
   500.........510.........520.....
Predicted Secondary structure 












Query SS confidence 

























Query Sequence  SDWQPKNSPPQYAGPIRLRQGLGQSK
Query Conservation      
 
      
 


  

  
 
Alig confidence  ..


.....















Template Conservation  .. 

.....     



 

 


Template Sequence  . . WLD. . . . . APFPNVTIHHLLTHTS
Template Known Secondary structure  ..T
S.....S

TT
BTT
S
Template Predicted Secondary structure  .......









Template SS confidence 

























   81.. ......90.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions