Job Description P02918 Confidence 99.07% Date Thu Jan 5 10:57:34 GMT 2012 Rank 63 Aligned Residues 209 % Identity 16% Template c3p09A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:beta-lactamase; PDBTitle: crystal structure of beta-lactamase from francisella tularensis Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.				.	.	.		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.
Predicted Secondary structure																			.	.	.				.
Query SS confidence																			.	.	.				.
Query Sequence		L	R	Q	V	G	S	N	I	K	P	F	L	Y	T	A	A	M	.	.	.	D	K	G	.	L	T	L	A	S	M	L	N	D	V	P	I	S	R	W	D	A	S	A	G	S	D	W	Q	P	K	N	S	P	P	Q	Y	A	G	P	I	R	L	R	Q	G	L	G	Q	S	K	N	V	V	M	V	R	A	M	R	A
Query Conservation																			.	.	.				.
Alig confidence																			.	.	.				.																								.	.
Template Conservation																																																	.	.
Template Sequence		H	F	P	I	C	S	V	F	K	F	L	L	V	G	A	I	L	D	Y	D	X	H	N	Q	G	F	L	D	K	K	I	P	I	N	Q	D	D	I	G	K	L	G	Y	A	P	I	T	.	.	A	K	N	V	G	K	T	L	T	I	S	Q	L	N	Y	A	A	I	L	S	D	S	P	A	S	N	I	L	V	R	E
Template Known Secondary structure						G	G	G																S	T	T	G	G	G											T	T					T	T	G	.	.	G	G		T	T	S													T	T
Template Predicted Secondary structure																																																	.	.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		536		.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.							.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.
Predicted Secondary structure			.																				.	.	.	.	.	.
Query SS confidence			.																				.	.	.	.	.	.
Query Sequence		M	.	G	V	D	Y	A	A	E	Y	L	Q	R	F	G	F	P	A	Q	N	I	.	.	.	.	.	.	V	H	T	E	S	L	A	L	G	S	A	S	F	T	P	M	Q	V	A	R	G	Y	A	V	M	A	N	G	G	F	L	V	D	P	W	F	I	S	K	I	E	N	D	Q	G	G	V	I	F	E	A	K	P
Query Conservation			.																				.	.	.	.	.	.
Alig confidence			.																				.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	G	L	Q	N	L	N	K	F	I	K	K	L	G	D	N	D	T	I	I	T	A	D	E	P	E	I	N	Y	T	Q	P	H	S	N	I	N	K	T	T	P	K	A	I	T	K	D	I	Y	K	L	A	F	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T												T	T			S		B					T	T	G	G	G				T	T			T	T																	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		609	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	A	C	P	E	C	D	I	P	V	I	Y	G	D	T	Q	K	S	N	V	L	E	N	N	D	V	E	D	V	A	I	S	R	E	Q	Q	N	V	S	V	P	M	P	Q	L	E	Q	A	N	Q	A	L	V	A	K	T	G	A	Q	E	Y	A	P	H	V	I	N	T	P	L	A	F	L	I	K	S	A	L	N
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	I	L	D	K	K	H	K	D	I	F	I	K	Y	L	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																																		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		689	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.						.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.
Predicted Secondary structure																																														.	.	.	.	.
Query SS confidence																																														.	.	.	.	.
Query Sequence		T	N	I	F	G	E	P	G	W	Q	G	T	G	W	R	A	G	R	D	L	Q	R	R	D	I	G	G	K	T	G	T	T	N	S	S	K	D	A	W	F	S	G	Y	G	.	.	.	.	.	P	G	V	V	T	S	V	W	I	G	F	D	D	H	R	R	N	L	G	H	T	T	A	S	G	A	I	K	D	Q	I
Query Conservation																																														.	.	.	.	.
Alig confidence				.	.	.	.	.	.																																					.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	N	.	.	.	.	.	.	N	T	G	A	N	R	I	A	F	S	X	P	K	D	W	I	I	G	D	K	T	G	T	C	G	Q	Y	A	A	T	N	D	V	A	I	I	W	P	K	N	Q	Q	P	I	A	L	G	I	L	Y	T	N	P	N	D	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				.	.	.	.	.	.		T	T	T	T	T	G	G	G	G	S		T	T	S										S	S	T	T											T	T	S												T	T		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure				.	.	.	.	.	.																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		205	.							.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		764	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	Y	E	G	G	A	K	S	A	Q	P	A	W	D	A	Y	M	K	A	V	L	E
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	N	A	P	S	N	E	E	I	I	Q	Q	A	A	K	L	I	A	N
Template Known Secondary structure		.	.	.	.	.	T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions