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Job DescriptionP02918
Confidence97.88%DateThu Jan 5 10:57:34 GMT 2012
Rank76Aligned Residues133
% Identity14%Templatec3mfdB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:d-alanyl-d-alanine carboxypeptidase dacb; PDBTitle: the structure of the beta-lactamase superfamily domain of d-alanyl-d-2 alanine carboxypeptidase from bacillus subtilis
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  ALVSINPQNGAVMALVGGFDFNQSKFNRATQALRQVGSNIKPFLYTAAMDKGLTLASMLNDVPISRWDASAGSDWQPKNS
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Template Sequence  SAIIIDGASGRVLYAKDE. . . . . . . . . . . . HQKRRIASITKIXTAVLAIESG. KXDQTVTVSANAV. . . RTEGSAIYLTE
Template Known Secondary structure  TTT

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B

GGGGTT.
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T
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Query Sequence  PPQYAGPIRLRQGLGQSKNVVMVRAMRAMG. . . . . . VDYAAEYLQRFGFPAQNIVHTESLA. LGSASFTPMQVARG
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Template Sequence  GQKVKLKDLVYGLXLRSGNDAAVAIAEHVGGSLDGFVYXXNQKAEQLGXKNTRFQNPHGLDDHENHYSTAYDXAIL
Template Known Secondary structure  T


SST
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BB
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Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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