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Job DescriptionP02918
Confidence99.75%DateThu Jan 5 10:57:34 GMT 2012
Rank45Aligned Residues228
% Identity18%Templatec3lezA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:beta-lactamase; PDBTitle: crystal structure of a halotolerant bacterial beta-lactamase
Resolution1.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   428.430.........440.........450.........460.........470......... 480.........490.........500.....
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Query Sequence  ALVSINPQNGAVMALVGGFDFNQSKFNRATQALRQVGSNIKPFLYTAAMDKG. . LTLASMLNDVPISRWDASAGSDWQPK
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Template Sequence  GVYAIDTGADKEISYREN. . . . . . . . . . . . . ERFAYTSTFKPLAVGAVLQTKSDEELEETITYSEEDLVTYSP. . . ITEQ
Template Known Secondary structure  TTTTSTT.............S
GGGG

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GGG

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T...TGGG
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   61........70........ .80.........90.........100.........110.........120 ....
 
   506...510.........520.........530....... ..540.........550...... ...560.........570........
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Query Sequence  NSPPQYAGPIRLRQGLGQSKNVVMVRAMRAMG. VDYAAEYLQRFGFPAQNIV. . . . . . HTESLALGSASFTPMQVARGYA
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Template Sequence  HVDEGMTLVEIADAAIRYSDNTAGNLLLEAMGGPDELETILRDIGDETIEMDRYETELNEAKPGDIRDTSTAKAMATTLQ
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TTT


TTSTT

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B



TTGGG


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TT
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   125....130.........140.........150.........160.........170.........180.........190.........200....
 
   579580.........590.........600.........610.........620.........630.........640.........650........
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Query Sequence  VMANGGFLVDPWFISKIENDQGGVIFEAKPKVACPECDIPVIYGDTQKSNVLENNDVEDVAISREQQNVSVPMPQLEQAN
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Template Sequence  QYVLE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TS...........................................................................
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   205....
 
   659660.........670.........680.........690.........700.........710.........720... ......730....
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Query Sequence  QALVAKTGAQEYAPHVINTPLAFLIKSALNTNIFGEPGWQGTGWRAGRDLQRRDIGGKTGTTNSS. KDAWFSGYGPG. . .
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Template Sequence  . . . . . . . . . . . . . . DVLDADRREVLTNMLINNT. . . . . . TGDALIRAGVPDGWTVGDKTGAGGYGTRNDIGIIWPEGDEE
Template Known Secondary structure  ..............SSS
T
S......S
TTTGGGGS
TT
TTT
TTT

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   210.........220........ .230.........240.........250.........260.........
 
   735....740.........750.........760.........770.........780....
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Query Sequence  . VVTSVWIGFDDHRRNLGHTTASGAIKDQISGYEGGAKSAQPAWDAYMKAV
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Template Sequence  PIVIAIMSSRDEED. . . . . . . . . . . . . . . . . . ADYDDKLIEKATEIVLQEL
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   270.........280... ......290.........300..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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