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Job DescriptionP02918
Confidence88.70%DateThu Jan 5 10:57:34 GMT 2012
Rank97Aligned Residues104
% Identity19%Templatec1zkjA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:extended-spectrum beta-lactamase; PDBTitle: structural basis for the extended substrate spectrum of cmy-2 10, a plasmid-encoded class c beta-lactamase
Resolution1.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   290.........300.........310.........320.........330.........340.........350.........360.........
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Query Sequence  TITRKVQQAAQQAVRNNVLDYDMRHGYRGPANVLWKVGESAWDNNKITDTLKALPTYGPLLPAAVTSANPQQATAMLADG
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Template Sequence  PLRPVVDASIQPLLKEH. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTT...............................................................
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   8.10.........20....
 
   370.........380.........390.........400.........410.........420.........430.........440.........
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Query Sequence  STVALSMEGVRWARPYRSDTQQGPTPRKVTDVLQTGQQIWVRQVGDAWWLAQVPEVNSALVSINPQNGAVMALVGGFDFN
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RIPGMAVAVLK. DGKAHYFNYGVANR
Template Known Secondary structure  ......................................................T
S.TTBS
T
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   25....30..... ....40.........
 
   450.........460.........470...... ... 480.........490.........500.........510.........520.....
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Query Sequence  QSKFNRATQALRQVGSNIKPFLYTAAM. . . DKG. LTLASMLNDVPISRWDASAGSDWQPKNSPPQYAGPIRLRQGLGQSK
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Template Sequence  ESGAGVSEQTLFEIGSVSKTLTATLGAYAVVKGAMQLDDKASR. . . . . . . . . . . . . HAP. WLKGSAFDSITMGELATYSA
Template Known Secondary structure  TT

B

TT
B
GGGTTS

TTSBGGG.............G
G.GGTTSGGGSSBTT
S
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   50.........60.........70.........80.........90.. ... ....100.........110.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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