Job Description P02918 Confidence 99.40% Date Thu Jan 5 10:57:34 GMT 2012 Rank 60 Aligned Residues 229 % Identity 18% Template c1i2sA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:beta-lactamase; PDBTitle: beta-lactamase from bacillus licheniformis bs3 Resolution 1.70 Å

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		428	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	V	S	I	N	P	Q	N	G	A	V	M	A	L	V	G	G	F	D	F	N	Q	S	K	F	N	R	A	T	Q	A	L	R	Q	V	G	S	N	I	K	P	F	L	Y	T	A	A	M	D	K	G	L	T	L	A	S	M	L	N	D	V	P	I	S	R	W	D	A	S	A	G	S	D	W	Q	P	K	N	S
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Sequence		G	I	F	A	L	D	T	G	T	N	R	T	V	T	Y	R	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	F	A	F	A	S	T	I	K	A	L	T	V	G	V	L	L	Q	Q	.	K	S	I	E	D	L	N	Q	R	I	T	Y	T	R	D	D	L	V	N	Y	N	P	I	T	E	K	H	V
Template Known Secondary structure								T	T	T	T						S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.						G	G	G													.	S		T	G	G	G	G							G	G	G			S			T	T	G	G	G	S	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.														.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		508	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.		.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.							.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580
Predicted Secondary structure																															.																					.	.	.	.	.	.
Query SS confidence																															.																					.	.	.	.	.	.
Query Sequence		P	P	Q	Y	A	G	P	I	R	L	R	Q	G	L	G	Q	S	K	N	V	V	M	V	R	A	M	R	A	M	.	G	V	D	Y	A	A	E	Y	L	Q	R	F	G	F	P	A	Q	N	I	V	.	.	.	.	.	.	H	T	E	S	L	A	L	G	S	A	S	F	T	P	M	Q	V	A	R	G	Y	A	V	M
Query Conservation																															.																					.	.	.	.	.	.
Alig confidence																															.																					.	.	.	.	.	.
Template Conservation
Template Sequence		D	T	G	M	T	L	K	E	L	A	D	A	S	L	R	Y	S	D	N	T	A	Q	N	L	I	L	K	Q	I	G	G	P	E	S	L	K	K	E	L	R	K	I	G	D	E	V	T	N	P	E	R	F	E	P	E	L	N	E	V	N	P	G	E	T	Q	D	T	S	T	A	R	A	L	A	T	S	L	Q	A	F
Template Known Secondary structure		T	T																											T	T												T	T			S							T	T	G	G	G				T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		581	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	G	G	F	L	V	D	P	W	F	I	S	K	I	E	N	D	Q	G	G	V	I	F	E	A	K	P	K	V	A	C	P	E	C	D	I	P	V	I	Y	G	D	T	Q	K	S	N	V	L	E	N	N	D	V	E	D	V	A	I	S	R	E	Q	Q	N	V	S	V	P	M	P	Q	L	E	Q	A	N	Q	A
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		194	.	.
		661	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730			.	.	.	.				.
Predicted Secondary structure																																																																								.	.					.	.	.
Query SS confidence																																																																								.	.					.	.	.
Query Sequence		L	V	A	K	T	G	A	Q	E	Y	A	P	H	V	I	N	T	P	L	A	F	L	I	K	S	A	L	N	T	N	I	F	G	E	P	G	W	Q	G	T	G	W	R	A	G	R	D	L	Q	R	R	D	I	G	G	K	T	G	T	T	N	S	S	K	D	A	W	F	S	G	.	.	Y	G	P	G	.	.	.	V
Query Conservation																																																																								.	.					.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.																												.						.	.					.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.																												.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	D	K	L	P	S	E	K	R	E	L	L	I	D	W	M	K	R	N	T	.	.	.	.	.	.	T	G	D	A	L	I	R	A	G	V	P	E	G	W	E	V	A	D	K	T	G	A	G	S	Y	G	T	.	R	N	D	I	A	I	I	W	P	P	K	G	D	P	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	T	T	S														T		S	.	.	.	.	.	.	S		T	T	T					S		T	T											T	T	T		.										S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.																												.
Template SS confidence
														197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.							.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		736	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	S	V	W	I	G	F	D	D	H	R	R	N	L	G	H	T	T	A	S	G	A	I	K	D	Q	I	S	G	Y	E	G	G	A	K	S	A	Q	P	A	W	D	A	Y	M	K	A	V
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	A	V	L	S	S	R	D	K	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	Y	D	D	K	L	I	A	E	A	T	K	V	V	L	K	A	L
Template Known Secondary structure										S	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.																			.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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