Job Description P0A6R0 Confidence 99.60% Date Thu Jan 5 11:03:43 GMT 2012 Rank 90 Aligned Residues 231 % Identity 16% Template c3lmaC_ PDB info PDB header:membrane protein Chain: C: PDB Molecule:stage v sporulation protein ad (spovad); PDBTitle: crystal structure of the stage v sporulation protein ad2 (spovad) from bacillus licheniformis. northeast structural3 genomics consortium target bir6. Resolution 1.99 Å

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	M	G	F	E	A	A	T	R	A	I	E	M	A	G	I	E	K	D	Q	I	G	L	I	V	V	A	T	T	S	A	T	H	A	F	P	S	A	A	C	Q	I	Q	S	M	L	G	I	K	G	C	P	A	F	D	V	A	A	A	C	A	G	F	T	Y	A	L	S	V	A	D	Q	Y	V	K	S	G	A	V
Query Conservation
Alig confidence																																						.	.	.											.	.	.
Template Conservation																																						.	.	.											.	.	.
Template Sequence		R	K	L	X	E	D	A	V	Q	S	A	L	S	K	Q	N	L	K	K	E	D	I	D	I	F	L	A	G	D	L	L	N	Q	N	V	T	.	.	.	A	N	Y	V	A	R	H	L	K	I	.	.	.	P	F	L	C	L	F	G	A	C	S	T	S	X	E	S	I	A	I	S	S	A	L	I	D	G	G	F	A
Template Known Secondary structure																T	T			G	G	G		S							T	T		S	S	S	S	.	.	.									T		.	.	.								S	T	T															T	T	S
Template Predicted Secondary structure																																						.	.	.											.	.	.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.				.	.	.	.	.	.	.	.	100	.				.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150										.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.
Query Sequence		K	Y	A	L	V	V	G	S	D	V	L	A	R	T	C	D	P	T	D	.	.	.	.	.	.	.	.	.	R	G	T	I	I	I	F	G	D	G	A	G	A	A	V	L	A	A	S	E	E	P	G	I	I	S	T	H	L	H	A	D	G	S	Y	G	E	L	L	T	L	P	N	A	D	R	V	N	P	E	N	S
Query Conservation																					.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	R	A	L	A	A	T	S	S	H	N	A	T	A	E	R	Q	F	R	Y	P	T	E	Y	G	G	Q	K	P	G	T	A	T	S	T	V	T	G	S	G	A	V	V	L	S	Q	Q	P	G	G	I	K	I	T	S	A	T	V	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	I
Template Known Secondary structure		S										T	T	T	G	G	G	G	T				G	G	G	T					S	S															S	S			S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		B
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.																			190	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.				.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.					.	.	.	270	.	.	.	.	.
Predicted Secondary structure																																																.	.	.																			.	.	.	.
Query SS confidence																																																.	.	.																			.	.	.	.
Query Sequence		I	H	L	T	M	A	G	N	E	V	F	K	V	A	V	T	E	L	A	H	I	V	D	E	T	L	A	A	N	N	L	D	R	S	Q	L	D	W	L	V	P	H	Q	A	N	L	.	.	.	R	I	I	S	A	T	A	K	K	L	G	M	S	M	D	N	V	V	.	.	.	.	V	T	L	D	R	H	G	N	T
Query Conservation																																																.	.	.																			.	.	.	.
Alig confidence																																																.	.	.																			.	.	.	.
Template Conservation
Template Sequence		D	L	G	I	T	D	S	Q	D	X	G	S	A	X	A	P	A	A	A	D	T	I	K	Q	H	L	E	D	L	G	R	T	P	D	D	Y	D	L	I	L	T	G	D	L	S	G	V	G	S	P	I	L	K	D	L	L	K	E	E	G	I	N	V	G	T	K	H	N	D	C	G	L	X	I	Y	T	P	D	S	G
Template Known Secondary structure								T	T																						T			G	G	G		S					S	S																T	T				G	G	G				G	G	G	T	S	S
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	A	S	V	P	C	A	L	D	E	A	V	R	D	G	R	I	K	P	G	Q	L	V	L	L	E	A	F	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	A	C	S	A	V	V	T	F	A	H	I	F	K	E	I	E	A	G	R	L	N	R	V	L	V	V	A	T	G	A
Template Known Secondary structure												T							T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions