Job Description P0A6R0 Confidence 100.00% Date Thu Jan 5 11:03:43 GMT 2012 Rank 34 Aligned Residues 280 % Identity 19% Template c3lehA_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative hydroxymethylglutaryl-coa synthase; PDBTitle: the crystal structure of smu.943c from streptococcus mutans ua159 Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Y	T	K	I	I	G	T	G	S	Y	L	P	E	Q	V	R	T	N	A	D	L	E	K	M	V	D	T	S	D	E	W	I	V	T	R	T	G	I	R	E	R	H	I	A	A	P	N	E	T	V	S	T	M	G	F	E	A	A	T	R	A	I	E	M	A	G	I	E	K	D	Q	I	G	L	I	V	V	A	T
Query Conservation
Alig confidence																													.	.																																							.	.
Template Conservation																													.	.																																							.	.
Template Sequence		M	R	I	G	I	D	K	I	G	F	T	S	S	Q	Y	V	L	N	M	K	D	L	A	E	A	R	G	.	.	E	Q	K	F	S	K	G	L	L	L	N	A	L	S	I	A	P	I	T	D	D	V	V	T	L	A	A	G	S	A	N	E	I	L	T	A	E	D	.	.	K	E	K	I	D	M	V	I	L	A	T
Template Known Secondary structure															S													T	.	.				T	T	T	T	T										T	T	S												T	T						.	.
Template Predicted Secondary structure																													.	.																																							.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		T	S	A	T	H	A	F	P	S	A	A	C	Q	I	Q	S	M	L	G	I	K	.	G	C	P	A	F	D	V	A	A	A	C	A	G	F	T	Y	A	L	S	V	A	D	Q	Y	V	K	S	G	A	V	K	Y	A	L	V	V	G	S	D	V	L	A	R	T	C	D	P	T	D	R	G	T	I	I	I	F	G	D
Query Conservation																							.
Alig confidence					.	.	.																.																																								.	.	.	.
Template Conservation					.	.	.																																																								.	.	.	.
Template Sequence		E	S	D	.	.	.	S	K	A	G	A	V	Y	V	H	S	L	L	G	I	Q	P	F	A	R	S	F	E	M	K	E	A	C	Y	S	A	T	A	A	L	N	Y	A	K	L	H	V	E	K	H	P	D	T	R	V	L	V	L	A	S	D	.	.	.	.	I	A	K	Y	I	G	T	P	G	E	S	T	Q	G	A
Template Known Secondary structure					.	.	.												T	T			S	S								S	T	T	T																S	T	T										.	.	.	.							S	T	T	G	G	G
Template Predicted Secondary structure					.	.	.																																																								.	.	.	.
Template SS confidence
		79	80	.				.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.					.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	G	A	A	V	L	A	A	S	E	E	P	G	I	I	S	T	H	L	H	A	D	G	S	Y	G	E	L	L	T	L	P	N	A	D	R	V	N	P	E	N	S	I	H	L	T	M	A	G	N	E	V	F	K	V	A	V	T	E	L	A	H	I	V	D	E	T	L	A	A	N	N	L	D	R	S	Q	L	D
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	S	I	A	M	L	V	K	K	D	P	R	I	L	I	L	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	T	L	A	Q	T	R	D	I	S	T	K	Q	Y	L	D	M	L	K	T	T	W	A	E	Y	Q	K	R	F	D	V	S	L	T	D	F	A
Template Known Secondary structure											S		S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S																														T			G	G	G		S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.																										.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.												.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290		.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.																														.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.																														.
Query Sequence		W	L	V	P	H	Q	A	N	L	R	I	I	S	A	T	A	K	K	L	G	M	S	.	.	.	.	.	.	.	.	.	.	.	M	D	N	V	V	V	T	L	D	R	H	G	N	T	S	A	A	S	V	P	C	A	L	D	E	A	V	R	D	.	G	R	I	K	P	G	Q	L	V	L	L	E	A	F	G	G	G
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.																														.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.																														.
Template Conservation
Template Sequence		A	F	C	F	H	L	P	F	P	K	L	A	L	K	G	F	N	K	I	D	K	Q	P	S	D	L	Q	E	K	L	K	V	N	F	E	A	S	I	L	Y	S	K	Q	I	G	N	I	Y	T	G	S	L	F	L	G	L	L	S	L	L	E	N	S	Q	N	L	V	A	G	D	K	I	A	L	F	S	Y	G	S	G
Template Known Secondary structure								S	S																																					B			G	G	G														S	S			T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		308	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	W	G	S	A	L	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	A	E	I	F	T	G	T
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		311	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions