Job Description P0A6R0 Confidence 99.90% Date Thu Jan 5 11:03:43 GMT 2012 Rank 66 Aligned Residues 307 % Identity 18% Template c3e60A_ PDB info PDB header:transferase Chain: A: PDB Molecule:3-oxoacyl-[acyl-carrier-protein ] synthase ii; PDBTitle: crystal structure of 3-oxoacyl-(acyl carrier protein)2 synthase ii from bartonella henselae Resolution 1.95 Å

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		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.																														.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50
Predicted Secondary structure				.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	Y	.	T	K	I	I	G	T	G	S	Y	L	P	E	Q	V	R	T	N	A	D	L	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	V	D	T	S	D	E	W	I	V	T	R	T	G	I	R	E	R	H	I	A	A	P	N	E	T
Query Conservation				.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.													.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation																	.																																																											.
Template Sequence		M	R	R	V	V	I	T	G	L	G	L	V	S	P	L	.	A	G	D	V	E	Y	S	W	K	R	L	L	E	G	K	S	G	V	R	R	I	T	E	F	D	V	S	D	L	S	C	Q	I	A	A	R	I	P	V	G	D	G	T	N	G	T	Y	N	A	D	L	H	M	E	S	K	E	Q	.	R	K	V	D	A
Template Known Secondary structure															S	S	.		S	S										T	T									S	S			T	T	S	S									B	S	S	S		T	T		B		G	G	G	T	S						.	T	T	S
Template Predicted Secondary structure																	.																																																											.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.						.	.	.	.	.	.	.	80	.	.	.	.																											.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	S	T	M	G	F	E	A	A	T	R	A	I	E	M	A	G	I	E	K	D	Q	.	.	.	.	.	I	G	L	I	V	V	A	T	T	S	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	A	F	P	S	A	A	C	Q	I	Q	S	M	L	G
Query Conservation																								.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	I	V	Y	A	I	A	A	A	D	Q	A	L	A	D	A	E	W	F	P	K	S	D	E	D	Q	I	C	T	G	V	L	I	G	S	G	I	G	G	I	E	G	I	V	E	A	G	Y	T	L	R	D	K	G	P	R	R	I	S	P	F	F	I	P	G	R	L	I	N	L	A	S	G	Y	V	S	I	K	Y	G
Template Known Secondary structure																		T					S						T								S	S		S																G	G	G	S		T	T	T	T	T	T	T		T	T											T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140																.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	K	G	C	P	A	F	D	V	A	A	A	C	A	G	F	T	Y	A	L	S	V	A	D	Q	Y	V	K	S	G	A	V	K	Y	A	L	V	V	G	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	L	A	R	T	C	D	P	T	D	R	G	T	I	I	I	F	G	D	G	A	G	A	A
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.
Template Sequence		L	R	G	.	P	N	H	S	V	V	T	A	C	S	T	G	A	H	A	I	G	D	A	A	R	L	I	A	L	G	D	A	D	V	M	L	A	G	G	T	E	S	P	I	N	R	I	S	L	A	G	F	S	A	C	R	A	L	S	T	C	R	N	D	D	P	E	R	A	S	R	P	Y	D	V	D	R	D	G	F
Template Known Secondary structure				S	.								G	G	G															T	T	S		S												S										T	T		B			S		T	T	S	G	G	G	S			T	T	B	T	T			S	B
Template Predicted Secondary structure					.
Template SS confidence
		159	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	A	A	S	E	E	P	G	I	I	S	T	H	L	H	A	D	G	S	Y	G	E	L	L	T	L	P	N	A	D	R	V	N	P	E	N	S	I	H	L	T	M	A	G	N	E	V	F	K	V	A	V	T	E	L	A	H	I	V	D	E	T	L	A	A	N	N	L	D	R	S	Q	L	D	W	L	V	P	H
Query Conservation
Alig confidence																																																	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.
Template Sequence		V	M	G	E	G	A	A	I	V	V	L	E	E	L	E	H	A	K	K	R	G	A	R	I	Y	A	E	I	I	G	Y	G	L	S	G	D	A	Y	H	I	T	A	P	S	E	S	G	.	.	.	.	.	.	E	G	A	Q	R	S	M	M	A	A	L	K	R	A	Q	V	N	V	S	E	L	D	Y	I	N	A	H
Template Known Secondary structure			B	B																	T	T																	S		S	S	S			T	T		.	.	.	.	.	.															T			G	G	G
Template Predicted Secondary structure																																																	.	.	.	.	.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.							.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		245	.	.	.					.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.			.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.				.	290	.	.	.
Predicted Secondary structure						.	.	.	.																		.	.																								.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.																		.	.																								.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	N	L	.	.	.	.	R	I	I	S	A	T	A	K	K	L	G	M	S	M	D	N	V	.	.	V	V	T	L	D	R	H	G	N	T	S	A	A	S	V	P	C	A	L	D	E	A	V	.	.	.	R	D	G	R	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation						.	.	.	.																		.	.																								.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.																		.	.																								.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	T	S	T	M	A	D	V	I	E	L	A	A	V	E	R	V	L	G	Y	Y	A	P	Q	V	S	M	S	S	T	K	S	S	I	G	H	L	L	G	A	A	G	A	A	E	A	I	F	C	V	L	A	I	R	D	N	I	A	P	A	T	L	N	L	E	N	P	S	I	E	T	K	I	D	L	V	P	H	K	P
Template Known Secondary structure				S	S	T	T													G	G	G	G	G	G						T						B		G	G	G																T					B	T	T		S	S	B	S	S			S	S	B			B	S	S
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
				294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	K	P	G	Q	L	V	L	L	E	A	F	G	G	G	F	T	W	G	S	A	L	V	R
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		R	E	R	K	I	D	T	V	L	S	N	S	F	G	F	G	G	T	N	A	S	L	V	M	R
Template Known Secondary structure																T	T	T
Template Predicted Secondary structure
Template SS confidence
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions