Job Description P0A6R0 Confidence 100.00% Date Thu Jan 5 11:03:43 GMT 2012 Rank 17 Aligned Residues 311 % Identity 21% Template c3aleB_ PDB info PDB header:transferase Chain: B: PDB Molecule:os07g0271500 protein; PDBTitle: a type iii polyketide synthase that produces diarylheptanoid Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.													.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	Y	T	K	I	I	G	T	G	S	Y	L	P	E	Q	V	R	T	N	A	D	L	E	K	M	V	D	.	.	.	.	.	.	.	.	.	.	.	.	T	S	D	E	W	I	V	T	R	T	G	I	R	E	R	H	I	A	A	P	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	L	A	A	V	L	A	I	G	T	A	N	P	P	N	C	V	T	Q	E	E	I	P	D	F	Y	F	R	V	T	N	S	D	H	L	T	A	L	K	D	K	F	K	R	I	C	Q	E	M	G	V	Q	R	R	Y	L	H	H	T	E	E	M	L	S	A	H	P	E	F	V	D	R	D	A	P	S	L	D	A	R
Template Known Secondary structure		S													S					T	T	T									T	T		T	T														T	S			S					S								T							T	T	S
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
							49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure		.	.	.	.	.																																																						.										.
Query SS confidence		.	.	.	.	.																																																						.										.
Query Sequence		.	.	.	.	.	E	T	V	S	T	M	G	F	E	A	A	T	R	A	I	E	M	A	G	I	E	K	D	Q	I	G	L	I	V	V	A	T	T	S	A	T	H	A	F	P	S	A	A	C	Q	I	Q	S	M	L	G	I	K	.	G	C	P	A	F	D	V	A	A	.	A	C	A	G	F	T	Y	A	L	S	V
Query Conservation		.	.	.	.	.																																																						.										.
Alig confidence		.	.	.	.	.																																			.																			.										.
Template Conservation																																									.
Template Sequence		L	D	I	A	A	D	A	V	P	E	L	A	A	E	A	A	K	K	A	I	A	E	W	G	R	P	A	A	D	I	T	H	L	V	V	T	T	N	S	.	G	A	H	V	P	G	V	D	F	R	L	V	P	L	L	G	L	R	P	S	V	R	R	T	M	L	H	L	N	G	C	F	A	G	C	A	A	L	R	L
Template Known Secondary structure																										S		G	G	G									S	S	.				S	S											T			T	T										G	G	G
Template Predicted Secondary structure																																									.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.							.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.
Query Sequence		A	D	Q	Y	V	K	S	G	A	V	K	Y	A	L	V	V	G	S	D	V	L	A	R	T	C	D	P	T	D	R	G	T	.	.	.	.	.	.	I	I	I	F	G	D	G	A	G	A	A	V	L	A	A	S	E	E	P	G	I	I	S	T	H	L	H	A	D	G	S	Y	G	E	L	L	T	L	P	N	A	D
Query Conservation																																		.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.
Template Conservation
Template Sequence		A	K	D	L	A	E	N	S	R	G	A	R	V	L	V	V	A	A	E	L	T	L	M	Y	F	T	G	P	D	E	G	C	F	R	T	L	L	V	Q	G	L	F	G	D	G	A	A	A	V	I	V	G	A	D	A	D	D	V	E	R	P	L	F	E	I	V	S	A	A	Q	T	I	I	P	E	S	D	H	A	L
Template Known Secondary structure								T	S	T	T											G	G	G	T						T	T											B											S	S			S	S	S															T	T		T	T	T
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.				.	.	.	.	270	.	.
Predicted Secondary structure																																																																								.	.	.
Query SS confidence																																																																								.	.	.
Query Sequence		R	V	N	P	E	N	S	I	H	L	T	M	A	G	N	E	V	F	K	V	A	V	T	E	L	A	H	I	V	D	E	T	L	A	A	N	N	L	D	R	S	Q	L	D	W	L	V	P	H	Q	A	N	L	R	I	I	S	A	T	A	K	K	L	G	M	S	M	D	N	V	.	.	.	V	V	T	L	D	R	H
Query Conservation																																																																								.	.	.
Alig confidence																																								.	.	.																														.	.	.
Template Conservation																																								.	.	.
Template Sequence		N	M	R	F	T	E	R	R	L	D	G	V	L	G	R	Q	V	P	G	L	I	G	D	N	V	E	R	C	L	L	D	M	F	G	P	G	G	W	.	.	.	N	D	L	F	W	A	V	H	P	G	S	S	T	I	M	D	Q	V	D	A	A	L	G	L	E	P	G	K	L	A	A	S	R	R	V	L	S	D	Y
Template Known Secondary structure							S	S	S							T	T																						G	.	.	.	G	G	S																				T			G	G	G	G
Template Predicted Secondary structure																																								.	.	.
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.				.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	T	S	A	A	S	V	P	C	A	L	D	E	A	V	R	D	G	R	I	K	P	G	Q	L	V	L	L	E	A	F	G	G	G	F	T	W	G	S	A	L	V	R	F
Query Conservation
Alig confidence																					.	.
Template Conservation																					.	.
Template Sequence		G	N	M	S	G	A	T	V	I	F	A	L	D	E	L	R	R	Q	R	.	.	K	W	P	E	L	G	V	M	M	A	F	G	P	G	M	T	V	D	A	M	L	L	H	A
Template Known Secondary structure			B		G	G	G														.	.				S									T	T	T
Template Predicted Secondary structure																					.	.
Template SS confidence
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.			.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions