Job Description P0A6R0 Confidence 99.89% Date Thu Jan 5 11:03:43 GMT 2012 Rank 69 Aligned Residues 304 % Identity 14% Template c2ix4B_ PDB info PDB header:transferase Chain: B: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] synthase; PDBTitle: arabidopsis thaliana mitochondrial beta-ketoacyl acp2 synthase hexanoic acid complex Resolution 1.95 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.																						.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.																		.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	I	G	T	G	S	Y	L	P	E	Q	V	R	T	N	A	D	L	E	K	M	V	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	D	E	W	I	V	T	R	T	G	I	R	E	R	H	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.
Template Sequence		V	T	G	L	G	M	V	T	P	L	G	.	R	G	V	E	T	T	W	R	R	L	I	D	G	E	C	G	I	R	G	L	T	L	D	D	L	K	M	K	S	F	D	E	E	T	K	L	Y	T	F	D	Q	L	S	S	K	V	A	A	F	V	P	Y	G	S	N	P	G	E	F	D	E	A	L	W	L	N	S	K
Template Known Secondary structure										T	T		.		S										T	T									S	G	G	G			T	T	S													S									B	S	S	S	T	T	S	B						S		S	T
Template Predicted Secondary structure													.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.						.	.	.	.	.	.	80	.	.	.	.																											.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	N	E	T	V	S	T	M	G	F	E	A	A	T	R	A	I	E	M	A	G	I	E	K	D	Q	I	.	.	.	.	.	G	L	I	V	V	A	T	T	S	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	A	F	P	S	A	A	C	Q	I	Q
Query Conservation																													.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	V	A	N	F	I	G	Y	A	V	C	A	A	D	E	A	L	R	D	A	E	W	L	P	T	E	E	E	E	K	E	R	T	G	V	S	I	G	G	G	I	G	S	I	C	D	I	V	E	A	A	Q	L	I	C	E	K	R	L	R	R	L	S	P	F	F	I	P	K	I	L	V	N	M	A	S	G	H	V	S
Template Known Secondary structure		T																			T	T					S						T								S	S															T	T		G	G	G			T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.																.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	M	L	G	I	K	G	C	P	A	F	D	V	A	A	A	C	A	G	F	T	Y	A	L	S	V	A	D	Q	Y	V	K	S	G	A	V	K	Y	A	L	V	V	G	S	D	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	T	C	D	P	T	D	R	G	T	I	I	I	F	G	D	G
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.
Template Sequence		M	K	Y	G	F	Q	G	.	P	N	H	A	A	V	T	A	C	A	T	G	A	H	S	I	G	D	A	T	R	M	I	Q	F	G	D	A	D	V	M	V	A	G	G	T	E	S	S	I	D	A	L	S	V	A	G	F	S	R	S	R	A	L	S	T	K	F	N	S	S	P	Q	E	A	S	R	P	F	D	C	D
Template Known Secondary structure					T			S	.								G	G	G																T	S		S												S										T	T		B			T	T	T	T	S	G	G	G	S			T	T	B	T	T
Template Predicted Secondary structure									.
Template SS confidence
		194	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	A	A	V	L	A	A	S	E	E	P	G	I	I	S	T	H	L	H	A	D	G	S	Y	G	E	L	L	T	L	P	N	A	D	R	V	N	P	E	N	S	I	H	L	T	M	A	G	N	E	V	F	K	V	A	V	T	E	L	A	H	I	V	D	E	T	L	A	A	N	N	L	D	R	S	Q	L	D	W
Query Conservation
Alig confidence																																																					.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.
Template Sequence		R	D	G	F	V	I	G	E	G	S	G	V	I	V	L	E	E	Y	E	H	A	K	R	R	G	A	K	I	Y	A	E	L	C	G	Y	G	M	S	G	D	A	H	H	I	T	Q	P	P	E	D	G	.	.	.	.	.	.	K	G	A	V	L	A	M	T	R	A	L	R	Q	S	G	L	C	P	N	Q	I	D	Y
Template Known Secondary structure				S	B		B	B																	T	T																	S		S	S				T	T		.	.	.	.	.	.															T			G	G	G
Template Predicted Secondary structure																																																					.	.	.	.	.	.
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.							.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250						.	.	.	.	.	.	.	.	.	260	.	.	.	.					.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure												.	.	.	.	.															.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.															.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	V	P	H	Q	A	N	L	R	I	.	.	.	.	.	I	S	A	T	A	K	K	L	G	M	S	M	D	N	.	.	.	.	V	V	V	T	L	D	R	H	G	N	T	S	A	A	S	V	P	C	A	L	D	E	A	V	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation												.	.	.	.	.															.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.															.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	N	A	H	A	T	S	T	P	I	G	D	A	V	E	A	R	A	I	K	T	V	F	S	E	H	A	T	S	G	T	L	A	F	S	S	T	K	G	A	T	G	H	L	L	G	A	A	G	A	V	E	A	I	F	S	I	L	A	I	H	H	G	V	A	P	M	T	L	N	V	K	N	P	D	P	I	F	D	K
Template Known Secondary structure								S																						T	S		S					T						B		G	G	G																T						S			S	S	B		T	T		B	T
Template Predicted Secondary structure
Template SS confidence
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
									291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	G	R	I	K	P	G	Q	L	V	L	L	E	A	F	G	G	G	F	T	W	G	S	A	L	V	R
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	F	M	P	L	T	T	S	K	K	M	L	V	R	T	A	M	S	N	S	F	G	F	G	G	T	N	A	S	L	L	F	A
Template Known Secondary structure		T	B					S							S									T	T	T
Template Predicted Secondary structure
Template SS confidence
		427	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions