Job Description P0A6R0 Confidence 99.88% Date Thu Jan 5 11:03:43 GMT 2012 Rank 75 Aligned Residues 261 % Identity 14% Template c2iwyB_ PDB info PDB header:transferase Chain: B: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] synthase; PDBTitle: human mitochondrial beta-ketoacyl acp synthase Resolution 2.06 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.						.	.	.	.	.	.	.	.	80	.	.	.	.	.																											.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	T	V	S	T	M	G	F	E	A	A	T	R	A	I	E	M	A	G	I	E	K	D	.	.	.	.	.	Q	I	G	L	I	V	V	A	T	T	S	A	T	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	P	S	A	A	C	Q	I	Q	S	M
Query Conservation																									.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	S	P	T	I	M	A	I	G	A	A	E	L	A	M	K	D	S	G	W	H	P	Q	S	E	A	D	Q	V	A	T	G	V	A	I	G	M	G	M	I	P	L	E	V	V	S	E	T	A	L	N	F	Q	T	K	G	Y	N	K	V	S	P	F	F	V	P	K	I	L	V	N	M	A	A	G	Q	V	S	I	R
Template Known Secondary structure																				T					S						T								S																			G	G	G	S		T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.														.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	G	I	K	G	C	P	A	F	D	V	A	A	A	C	A	G	F	T	Y	A	L	S	V	A	D	Q	Y	V	K	S	G	A	V	K	Y	A	L	V	V	G	S	D	V	L	A	R	T	C	D	.	.	.	.	.	.	.	.	.	.	.	.	.	P	T	D	R	G	T	I	I	I	F	G	D	G	A	G	A	A
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.
Template Sequence		Y	K	L	K	G	.	P	N	H	A	V	S	T	A	C	T	T	G	A	H	A	V	G	D	S	F	R	F	I	A	H	G	D	A	D	V	M	V	A	G	G	T	D	S	C	I	S	P	L	S	L	A	G	F	S	R	A	R	A	L	S	T	N	S	D	P	K	L	A	C	R	P	F	H	P	K	R	D	G	F
Template Known Secondary structure			T			S	.								G	G	G																T	S		S												S										T	T		B				S		T	T	T	S			T	T		T	T				B
Template Predicted Secondary structure							.
Template SS confidence
		196	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	A	A	S	E	E	P	G	I	I	S	T	H	L	H	A	D	G	S	Y	G	E	L	L	T	L	P	N	A	D	R	V	N	P	E	N	S	I	H	L	T	M	A	G	N	E	V	F	K	V	A	V	T	E	L	A	H	I	V	D	E	T	L	A	A	N	N	L	D	R	S	Q	L	D	W	L	V	P	H
Query Conservation
Alig confidence																																																	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.
Template Sequence		V	M	G	E	G	A	A	V	L	V	L	E	E	Y	E	H	A	V	Q	R	R	A	R	I	Y	A	E	V	L	G	Y	G	L	S	G	D	A	G	H	I	T	A	P	D	P	E	G	.	.	.	.	.	.	E	G	A	L	R	C	M	A	A	A	L	K	D	A	G	V	Q	P	E	E	I	S	Y	I	N	A	H
Template Known Secondary structure			B	B																	T	T																	S		S	S	S			T	T		.	.	.	.	.	.															T			G	G	G
Template Predicted Secondary structure																																																	.	.	.	.	.	.
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.							.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		245	.	.	.	.	250	.	.	.	.						.	.	.	.	.	260	.	.	.	.	.			.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.												.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.												.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	N	L	R	I	I	S	A	T	.	.	.	.	.	A	K	K	L	G	M	S	M	D	N	V	.	.	V	V	T	L	D	R	H	G	N	T	S	A	A	S	V	P	C	A	L	D	E	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation												.	.	.	.	.												.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.												.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	T	S	T	P	L	G	D	A	A	E	N	K	A	I	K	H	L	F	K	D	H	A	Y	A	L	A	V	S	S	T	K	G	A	T	G	H	L	L	G	A	A	G	A	V	E	A	A	F	T	T	L	A	C	Y	Y	Q	K	L	P	P	T	L	N	L	D	C	S	E	P	E	F	D	L	N	Y	V	P	L	K
Template Known Secondary structure				S																	G	G	G	G	G	T	S											B		G	G	G																T					B	T	T		S				T	T			S				B	S	S
Template Predicted Secondary structure
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
			289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	R	D	G	R	I	K	P	G	Q	L	V	L	L	E	A	F	G	G	G	F	T	W	G	S	A	L	V	R
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		A	Q	E	W	K	T	E	K	R	F	I	G	L	T	N	S	F	G	F	G	G	T	N	A	T	L	C	I	A
Template Known Secondary structure								S	S											T	T	T
Template Predicted Secondary structure
Template SS confidence
		429	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions