Job Description P0A6R0 Confidence 99.96% Date Thu Jan 5 11:03:43 GMT 2012 Rank 46 Aligned Residues 260 % Identity 15% Template c2iikA_ PDB info PDB header:transferase Chain: A: PDB Molecule:3-ketoacyl-coa thiolase, peroxisomal; PDBTitle: crystal structure of human peroxisomal acetyl-coa acyl transferase 12 (acaa1) Resolution 2.55 Å

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		P	N	E	T	V	S	T	M	G	F	E	A	A	T	R	A	I	E	M	A	G	I	E	K	D	Q	I	G	L	I	V	V	A	T	T	S	A	T	H	A	F	P	S	A	A	C	Q	I	Q	S	M	L	G	I	K	.	G	C	P	A	F	D	V	A	A	A	C	A	G	F	T	Y	A	L	S	V	A	D	Q	Y
Query Conservation																																																									.
Alig confidence																																																									.
Template Conservation
Template Sequence		K	D	T	T	P	D	E	L	L	S	A	V	M	T	A	V	L	K	D	V	N	L	R	P	E	Q	L	G	D	I	C	V	G	N	V	L	Q	P	G	A	G	A	I	M	A	R	I	A	Q	F	L	S	D	I	P	E	T	V	P	L	S	T	V	N	R	Q	C	S	S	G	L	Q	A	V	A	S	I	A	G	G
Template Known Secondary structure		T	T																			T			G	G	G									S	S	S	G	G	G	G											T	T			T	T	S								G	G	G
Template Predicted Secondary structure
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	K	S	G	A	V	K	Y	A	L	V	V	G	S	D	V	L	A	R	T	C	D	P	T	D	R	G	T	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	R	N	G	S	Y	D	I	G	M	A	C	G	V	E	S	M	S	L	A	D	G	N	I	T	S	R	L	M	E	K	E	K	A	R	D	C	L	I	P	M	G	I	T	S	E	N	V	A	E	R	F	G	I	S	R	E	K	Q	D	T	F	A	L	A	S	Q	Q	K	A	A	R	A	Q	S	K	G	C	F	Q
Template Known Secondary structure				T	T	S		S										T	T	T			.				T	T	G	G	G						G	G	G	S													T	T																								T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
																																																155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	I	F	G	D	G	A	G	A	A	V	L	A	A	S	E	E	P	G	I	I	S	T	H	L	H	A	D	G	S	Y	G	E	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	E	I	V	P	V	T	T	T	V	H	D	D	K	G	T	K	R	S	I	T	V	T	Q	D	E	G	I	R	P	S	T	T	M	E	G	L	A	K	L	K	P	A	F	K	K	D	G	S	T	T	A	G	N	S	S	Q	V	S	D	G	A	A	A	I	L	L	A	R	R	S	K	A	E	E	L	G	L	P	I
Template Known Secondary structure		T	T	B										T	T	S									S		T	T			T	T												S	S	S	T	T					S	T	T	B																						T
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	L	P	N	A	D	R	V	N	P	E	N	S	I	H	L	T	M	A	G	N	E	V	F	K	V	A	V	T	E	L	A	H	I	V	D	E	T	L	A	A	N	N	L	D	R	S	Q	L	D	W	L	V	P	H	Q	A	N	L	R	I	I	S	A	T	A	K	K	L	G	M	S	M	D	N	V	V	V	T
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	V	L	R	S	Y	A	V	V	G	V	P	P	D	I	M	G	.	.	.	.	.	.	.	.	.	.	.	I	G	P	A	Y	A	I	P	V	A	L	Q	K	A	G	L	T	V	S	D	V	D	I	F	E	I	N	E	A	F	A	S	Q	A	A	Y	C	V	E	K	L	R	L	P	P	E	K	V	N	P	L
Template Known Secondary structure															G	G	G	G	G	.	.	.	.	.	.	.	.	.	.	.	G														T			G	G	G									S	B												T			G	G	G	B		T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.												320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
				269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.	.
Predicted Secondary structure		.	.																																												.
Query SS confidence		.	.																																												.
Query Sequence		.	.	L	D	R	H	G	N	T	S	A	A	S	V	P	C	A	L	D	E	A	V	R	D	G	R	I	K	P	G	Q	L	V	L	L	E	A	F	G	G	G	F	T	W	G	.	S	A	L	V	R	F
Query Conservation		.	.																																												.
Alig confidence		.	.																																												.
Template Conservation
Template Sequence		G	G	A	V	A	L	G	H	P	L	G	C	T	G	A	R	Q	V	I	T	L	L	N	E	L	K	R	R	G	K	R	A	Y	G	V	V	S	M	C	I	G	T	G	M	G	A	A	A	V	F	E	Y
Template Known Secondary structure																														T	S											T	T	T
Template Predicted Secondary structure
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions