Job Description P0A6R0 Confidence 99.92% Date Thu Jan 5 11:03:43 GMT 2012 Rank 62 Aligned Residues 304 % Identity 21% Template c2hg4A_ PDB info PDB header:transferase Chain: A: PDB Molecule:6-deoxyerythronolide b synthase; PDBTitle: structure of the ketosynthase-acyltransferase didomain of module 52 from debs. Resolution 2.73 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.																													.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	I	G	T	G	S	Y	L	P	E	Q	V	R	T	N	A	D	L	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	V	D	T	S	D	E	W	I	V	T	R	T	G	I	R	E	R	H	I	A	A	P	N	E	T	V	S	T	M	G	F
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation																																																																					.
Template Sequence		I	V	G	X	A	C	R	F	P	G	D	V	D	S	P	E	S	F	W	E	F	V	S	G	G	G	D	A	I	A	E	A	P	A	D	R	G	W	E	P	D	P	D	A	R	L	G	G	X	L	A	A	A	G	D	F	D	A	G	F	F	G	I	S	P	R	E	.	A	L	A	X	D	P	Q	Q	R	I	X	L
Template Known Secondary structure									B	T	T	T	B		S										T	T									G	G	G						S	S					B			T	T	T	T				T	G	G	G	T						.				S
Template Predicted Secondary structure																																																																					.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.					.	.	.	.	.	80	.	.	.	.	.	.	.	.																				.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																				.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	A	A	T	R	A	I	E	M	A	G	I	E	K	D	Q	I	G	.	.	.	.	L	I	V	V	A	T	T	S	A	T	H	A	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	A	C	Q	I	Q	S	M	L	G	I	K	G	C	P	A	F	D	V	A	A	A	C	A
Query Conservation																				.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation																																																																							.
Template Sequence		E	I	S	W	E	A	L	E	R	A	G	H	D	P	V	S	L	R	G	S	A	T	G	V	F	T	G	V	G	T	V	D	Y	G	P	R	P	D	E	A	P	D	E	V	L	G	Y	V	G	T	G	T	A	S	S	V	A	S	G	R	V	A	Y	C	L	G	L	E	G	.	P	A	X	T	V	D	T	A	C	S
Template Known Secondary structure											T	T			G	G	G	G	T	T	S														S			T	T	S	S		G	G	G	G	G	G																			T			S	.								G	G	G
Template Predicted Secondary structure																																																																							.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.										.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.
Query Sequence		G	F	T	Y	A	L	S	V	A	D	Q	Y	V	K	S	G	A	V	K	Y	A	L	V	V	G	S	D	V	.	.	.	.	.	.	.	.	.	L	A	R	T	C	D	P	T	D	R	G	T	I	I	I	F	G	D	G	A	G	A	A	V	L	A	A	S	E	E	P	G	I	I	S	T	H	L	H	A	D	G	S
Query Conservation																														.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	G	L	T	A	L	H	L	A	X	E	S	L	R	R	D	E	C	G	L	A	L	A	G	G	V	T	V	X	S	S	P	G	A	F	T	E	F	R	S	Q	G	G	L	A	A	D	G	R	C	K	P	F	S	K	A	A	D	G	F	G	L	A	E	G	A	G	V	L	V	L	Q	R	L	S	A	A	R	R	E
Template Known Secondary structure																T	T	S		S												S	T							T	T	S	S		B		T	T	S				T	T	B	T	T				B		B	B																	T
Template Predicted Secondary structure
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250						.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.
Query Sequence		Y	G	E	L	L	T	L	P	N	A	D	R	V	N	P	E	N	S	I	H	L	T	M	A	G	N	E	V	F	K	V	A	V	T	E	L	A	H	I	V	D	E	T	L	A	A	N	N	L	D	R	S	Q	L	D	W	L	V	P	H	Q	A	N	L	R	I	.	.	.	.	.	I	S	A	T	A	K	K	L	G
Query Conservation																																																																				.	.	.	.	.
Alig confidence																													.	.	.	.	.	.																																		.	.	.	.	.
Template Conservation																													.	.	.	.	.	.
Template Sequence		G	R	P	V	L	A	V	L	R	G	S	A	V	N	Q	D	G	A	S	N	G	L	T	A	P	S	G	.	.	.	.	.	.	P	A	Q	Q	R	V	I	R	R	A	L	E	N	A	G	V	R	A	G	D	V	D	Y	V	E	A	H	G	T	G	T	R	L	G	D	P	I	E	V	H	A	L	L	S	T	Y	G
Template Known Secondary structure		T																	S		S	S	S	S					.	.	.	.	.	.															T			G	G	G												T	T											T	T	T	T
Template Predicted Secondary structure																													.	.	.	.	.	.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.							.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
		260	.	.	.	.						.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.				.	290	.	.	.	.	.	.	.																														.	.	300	.	.
Predicted Secondary structure							.	.	.	.	.																									.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.																									.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	M	D	N	.	.	.	.	.	V	V	V	T	L	D	R	H	G	N	T	S	A	A	S	V	P	C	A	L	D	E	A	V	.	.	.	R	D	G	R	I	K	P	G	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	L	L	E
Query Conservation							.	.	.	.	.																									.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.																									.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	E	R	D	P	D	D	P	L	W	I	G	S	V	K	S	N	I	G	H	T	Q	A	A	A	G	V	A	G	V	X	K	A	V	L	A	L	R	H	G	E	X	P	R	T	L	H	F	D	E	P	S	P	Q	I	E	W	A	V	S	V	V	S	Q	A	R	S	W	P	A	G	E	R	P	R	R	A	G	V	S
Template Known Secondary structure		T	S	S		T	T	S							T						B		G	G	G	T	T														T						T	T			S	B		T	T	S									S								S	S
Template Predicted Secondary structure
Template SS confidence
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
		303	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	G	G	G	F	T	W	G	S	A	L	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	F	G	I	S	G	T	N	A	H	V	I	V	E
Template Known Secondary structure					T	T	S
Template Predicted Secondary structure
Template SS confidence
		438	.	440	.	.	.	.	.	.	.	.	.	450	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions