Job Description P0A6R0 Confidence 100.00% Date Thu Jan 5 11:03:43 GMT 2012 Rank 15 Aligned Residues 305 % Identity 20% Template c2f9aA_ PDB info PDB header:transferase Chain: A: PDB Molecule:3-hydroxy-3-methylglutaryl coenzyme a synthase 1; PDBTitle: hmg-coa synthase from brassica juncea in complex with f-244 Resolution 2.51 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	T	K	I	I	G	T	G	S	Y	L	P	E	Q	V	R	T	N	A	D	L	E	K	M	V	D	T	S	D	E	W	I	V	T	R	T	G	I	R	E	R	H	I	A	A	P	N	E	T	V	S	T	M	G	F	E	A	A	T	R	A	I	E	M	A	G	I	E	K	D	Q	I	G	L	I	V	V	A	T	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	V	G	I	L	A	M	D	I	Y	F	P	P	T	C	V	Q	Q	E	A	L	E	A	H	D	G	A	S	K	G	K	Y	T	I	G	L	G	Q	D	C	L	A	F	C	T	E	L	E	D	V	I	S	M	S	F	N	A	V	T	S	L	L	E	K	Y	K	I	D	P	K	Q	I	G	R	L	E	V	G	S	E
Template Known Secondary structure		S												S												S	S			T	T	T	T	T	T	T	T										T	T																		T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.																															.	.
Query SS confidence																					.	.	.																															.	.
Query Sequence		S	A	T	H	A	F	P	S	A	A	C	Q	I	Q	S	M	L	G	I	.	.	.	K	G	C	P	A	F	D	V	A	A	A	C	A	G	F	T	Y	A	L	S	V	A	D	Q	Y	V	K	S	G	A	.	.	V	K	Y	A	L	V	V	G	S	D	V	L	A	R	T	C	D	P	T	D	R	G	T	I	I	I
Query Conservation																					.	.	.																															.	.
Alig confidence																					.	.	.																															.	.														.	.	.	.
Template Conservation																																																																					.	.	.	.
Template Sequence		T	V	I	D	K	S	K	S	I	K	T	F	L	M	Q	L	F	E	K	C	G	N	T	D	V	E	G	V	D	S	T	N	A	C	Y	G	G	T	A	A	L	L	N	C	V	N	W	V	E	S	N	S	W	D	G	R	Y	G	L	V	I	C	T	D	S	A	V	.	.	.	.	Y	A	E	G	P	A	R	P	T
Template Known Secondary structure				S		S	S	S							T					T	T	T					B						S	G	G	G														T	S	T	T			S													.	.	.	.			S	S	T	T	G	G	G
Template Predicted Secondary structure																																																																					.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150					.	.	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.							.	.	230
Predicted Secondary structure																																																																									.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.
Query Sequence		F	G	D	G	A	G	A	A	V	L	A	A	S	E	E	P	G	I	I	S	T	H	L	H	A	D	G	S	Y	G	E	L	L	T	L	P	N	A	D	R	V	N	P	E	N	S	I	H	L	T	M	A	G	N	E	V	F	K	V	A	V	T	E	L	A	H	I	V	D	E	T	.	.	.	.	.	.	L	A	A
Query Conservation																																																																									.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.																												.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.
Template Sequence		G	G	A	A	A	I	A	M	L	I	G	P	D	A	P	I	V	F	E	S	K	L	R	G	S	H	M	A	H	V	Y	D	F	Y	K	P	N	L	.	.	.	.	.	.	A	S	E	Y	P	V	V	D	G	K	L	S	Q	T	C	Y	L	M	A	L	D	S	C	Y	K	H	L	C	N	K	F	E	K	L	E	G
Template Known Secondary structure													S	S		S																	S						T	.	.	.	.	.	.	T																																			S
Template Predicted Secondary structure																																								.	.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.							.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.				270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290		.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.																						.
Query SS confidence																																									.	.	.																						.
Query Sequence		N	N	L	D	R	S	Q	L	D	W	L	V	P	H	Q	A	N	L	R	I	I	S	A	T	A	K	K	L	G	M	S	M	D	N	V	V	V	T	L	.	.	.	D	R	H	G	N	T	S	A	A	S	V	P	C	A	L	D	E	A	V	R	D	.	G	R	I	K	P	G	Q	L	V	L	L	E	A	F	G	G
Query Conservation																																									.	.	.																						.
Alig confidence																																									.	.	.																						.
Template Conservation
Template Sequence		K	E	F	S	I	N	D	A	D	Y	F	V	F	H	S	P	Y	N	K	L	V	Q	K	S	F	A	R	L	L	Y	Y	D	A	K	V	Q	P	T	T	L	V	P	K	Q	V	G	N	M	Y	T	A	S	L	Y	A	A	F	A	S	L	V	H	N	K	H	S	D	L	A	G	K	R	V	V	M	F	S	Y	G	S
Template Known Secondary structure		S				G	G	G		S							S	S																		T	G	G	G											G	G	G														T	T	T		T	T										T
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		307	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	T	W	G	S	A	L	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	S	T	A	T	M	F	S	L	R
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		360	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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