Job Description P0A6R0 Confidence 99.86% Date Thu Jan 5 11:03:43 GMT 2012 Rank 82 Aligned Residues 303 % Identity 16% Template c2buiC_ PDB info PDB header:synthase Chain: C: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] synthase i; PDBTitle: e.coli beta-ketoacyl (acyl carrier protein) synthase i in2 complex with octanoic acid, 120k Resolution 2.4 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.						.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.																.	.	.	.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.																									.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.																									.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	Y	.	T	K	I	I	G	T	G	S	Y	L	P	E	Q	V	R	T	N	A	D	L	E	K	M	V	.	.	.	.	.	D	T	S	D	E	W	I	V	T	R	T	G	I	R	E	R	H	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	N	E	T	V	S	T	M	G	F	E	A	A
Query Conservation				.																									.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.														.											.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.
Template Sequence		M	K	R	A	V	I	T	G	L	G	I	V	S	S	I	G	.	N	N	Q	Q	E	V	L	A	S	L	R	E	G	R	S	G	I	T	F	S	Q	E	L	K	D	S	G	M	R	S	H	V	W	G	N	V	K	L	D	T	T	G	L	I	D	R	K	V	V	R	F	M	S	D	A	S	I	Y	A	F	L	S	M
Template Known Secondary structure														B	T	T	B	.	S	S											T													T	T		S												T	T	S	S						T	T
Template Predicted Secondary structure																		.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		60	.	.	.	.	.	.	.	.	.	70	.	.	.						.	.	.	.	.	.	80	.	.	.	.	.																												.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	R	A	I	E	M	A	G	I	E	K	D	Q	I	.	.	.	.	.	G	L	I	V	V	A	T	T	S	A	T	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	P	S	A	A	C	Q	I	Q	S	M	L	G	I	K	G	C	P	A	F	D
Query Conservation																.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																																																																													.
Template Sequence		E	Q	A	I	A	D	A	G	L	S	P	E	A	Y	Q	N	N	P	R	V	G	L	I	A	G	S	G	G	G	S	P	R	F	Q	V	F	G	A	D	A	M	R	G	P	R	G	L	K	A	V	G	P	Y	V	V	T	K	A	M	A	S	G	V	S	A	C	L	A	T	P	F	K	I	H	G	.	V	N	Y	S
Template Known Secondary structure									T							T	T		T	T								S	S														T	S	T	T							S							S	T	T								T	T	T	T			S	.
Template Predicted Secondary structure																																																																													.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140															.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	A	A	A	C	A	G	F	T	Y	A	L	S	V	A	D	Q	Y	V	K	S	G	A	V	K	Y	A	L	V	V	G	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	L	A	R	T	C	D	P	T	D	R	G	T	I	I	I	F	G	D	G	A	G	A	A	V	L	A	A	S	E	E	P	G
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	S	S	A	C	A	T	S	A	H	C	I	G	N	A	V	E	Q	I	Q	L	G	K	Q	D	I	V	F	A	G	G	G	E	E	L	C	W	E	M	A	C	E	F	D	A	M	G	A	L	S	T	K	Y	N	D	T	P	E	K	A	S	R	T	Y	D	A	H	R	D	G	F	V	I	A	G	G	G	G	M	V
Template Known Secondary structure					G	G	G															T	T	S		S																						T		B			S		T	T	S							T	T	B	T	T			S	B		B	B
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	S	T	H	L	H	A	D	G	S	Y	G	E	L	L	T	L	P	N	A	D	R	V	N	P	E	N	S	I	H	L	T	M	A	G	N	E	V	F	K	V	A	V	T	E	L	A	H	I	V	D	E	T	L	A	A	N	N	L	D	R	S	Q	L	D	W	L	V	P	H	Q	A	N	L	R	I	I	S	A
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.															.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.															.	.	.
Template Sequence		V	V	E	E	L	E	H	A	L	A	R	G	A	H	I	Y	A	E	I	V	G	Y	G	A	T	S	D	G	A	D	M	V	A	P	S	G	E	G	.	.	.	.	.	.	.	.	A	V	R	C	M	K	M	A	M	H	G	V	D	T	.	.	.	P	I	D	Y	L	N	S	H	G	T	S	T	P	V	G	D	V
Template Known Secondary structure												T	T																	S		S	S	S			S			.	.	.	.	.	.	.	.										T	T			S	.	.	.			S								S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.															.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.									.	.	.	280	.	.	.	.	.	.	.	.	.	290				.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		254	.						.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.				.	290	.	.	.																									.	.	.	.	.	.	300	.
Predicted Secondary structure				.	.	.	.	.																																		.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.																																		.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	A	.	.	.	.	.	K	K	L	G	M	S	M	D	N	V	V	V	T	L	D	R	H	G	N	T	S	A	A	S	V	P	C	A	L	D	E	A	V	.	.	.	R	D	G	R	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	P	G	Q	L	V	L	L
Query Conservation				.	.	.	.	.																																		.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.																																		.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	E	L	A	A	I	R	E	V	F	G	D	K	S	P	A	I	S	A	T	K	A	M	T	G	H	S	L	G	A	A	G	V	Q	E	A	I	Y	S	L	L	M	L	E	H	G	F	I	A	P	S	I	N	I	E	E	L	D	E	Q	A	A	G	L	N	I	V	T	E	T	T	D	R	E	L	T	T	V	M	S
Template Known Secondary structure												T	T								T						B		G	G	G																T									S	S	B		G	G	G	T	T	S		B			S
Template Predicted Secondary structure
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	F	G	G	G	F	T	W	G	S	A	L	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	S	F	G	F	G	G	T	N	A	T	L	V	M	R
Template Known Secondary structure						T	T	T
Template Predicted Secondary structure
Template SS confidence
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions