Job Description P0A6R0 Confidence 100.00% Date Thu Jan 5 11:03:43 GMT 2012 Rank 13 Aligned Residues 307 % Identity 22% Template c1u0mA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:putative polyketide synthase; PDBTitle: crystal structure of 1,3,6,8-tetrahydroxynaphthalene synthase (thns)2 from streptomyces coelicolor a3(2): a bacterial type iii polyketide3 synthase (pks) provides insights into enzymatic control of reactive4 polyketide intermediates Resolution 2.22 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.										30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.																		.	.	50	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	K	I	I	G	T	G	S	Y	L	P	E	Q	V	R	T	N	A	D	L	E	K	M	V	D	T	S	.	.	.	.	.	.	.	.	.	D	E	W	I	V	T	R	T	G	I	R	E	R	H	I	A	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	E	T	V	S	T	M	G	F
Query Conservation																													.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	T	L	C	R	P	S	V	S	V	P	E	H	V	I	T	M	E	E	T	L	E	L	A	R	R	R	H	T	D	H	P	Q	L	P	L	A	L	R	L	I	E	N	T	G	V	R	T	R	H	I	V	Q	P	I	E	D	T	L	E	H	P	G	F	E	D	R	N	K	V	Y	E	R	E	A	K	S	R	V	P
Template Known Secondary structure													S																	T	T		T	T											T								S	S						T	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																																															.										.
Query SS confidence																																															.										.
Query Sequence		E	A	A	T	R	A	I	E	M	A	G	I	E	K	D	Q	I	G	L	I	V	V	A	T	T	S	A	T	H	A	F	P	S	A	A	C	Q	I	Q	S	M	L	G	I	K	.	G	C	P	A	F	D	V	A	A	.	A	C	A	G	F	T	Y	A	L	S	V	A	D	Q	Y	V	K	S	G	A	V	K	Y	A
Query Conservation																																															.										.
Alig confidence																												.																			.										.
Template Conservation																												.
Template Sequence		A	V	I	Q	R	A	L	D	D	A	E	L	L	A	T	D	I	D	V	I	I	Y	V	S	C	T	.	G	F	M	M	P	S	L	T	A	W	L	I	N	E	M	G	F	D	S	T	T	R	Q	I	P	I	A	Q	L	G	C	A	A	G	G	A	A	I	N	R	A	H	D	F	C	T	A	Y	P	E	A	N	A
Template Known Secondary structure												T			G	G	G		S							S	S	.	S			S	S										T	T			T	T								S		G	G	G																S	T	T
Template Predicted Secondary structure																												.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.						.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.			.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.																					.	.
Query SS confidence																				.	.	.	.	.																					.	.
Query Sequence		L	V	V	G	S	D	V	L	A	R	T	C	D	P	T	D	R	G	.	.	.	.	.	T	I	I	I	F	G	D	G	A	G	A	A	V	L	A	A	S	E	E	P	.	.	G	I	I	S	T	H	L	H	A	D	G	S	Y	G	E	L	L	T	L	P	N	A	D	R	V	N	P	E	N	S	I	H	L	T	M
Query Conservation																				.	.	.	.	.																					.	.
Alig confidence																				.	.	.	.	.																					.	.																							.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.
Template Sequence		L	I	V	A	C	E	F	C	S	L	C	Y	Q	P	T	D	L	G	V	G	S	L	L	C	N	G	L	F	G	D	G	I	A	A	A	V	V	R	G	R	G	G	T	G	V	R	L	E	R	N	G	S	Y	L	I	P	K	T	E	D	W	I	M	Y	D	V	K	.	.	.	.	.	.	.	A	T	G	F	H	F
Template Known Secondary structure									G	G	G	G			T	T			S										B											T	T	T		S													S	S		T	T	T							.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.								.	.	230	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.				.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure																																																												.	.	.
Query SS confidence																																																												.	.	.
Query Sequence		A	G	N	E	V	F	K	V	A	V	T	E	L	A	H	I	V	D	E	T	L	A	A	N	N	L	D	R	S	Q	L	D	W	L	V	P	H	Q	A	N	L	R	I	I	S	A	T	A	K	K	L	G	M	S	M	D	N	V	.	.	.	V	V	T	L	D	R	H	G	N	T	S	A	A	S	V	P	C	A	L
Query Conservation																																																												.	.	.
Alig confidence																																																												.	.	.
Template Conservation
Template Sequence		L	L	D	K	R	V	P	A	T	M	E	P	L	A	P	A	L	K	E	L	A	G	E	H	G	W	D	A	S	D	L	D	F	Y	I	V	H	A	G	G	P	R	I	L	D	D	L	S	T	F	L	E	V	D	P	H	A	F	R	F	S	R	A	T	L	T	E	Y	G	N	I	A	S	A	V	V	L	D	A	L
Template Known Secondary structure					T	T	T	G	G	G														T	T	S			S	S			S							S												S		S		G	G	G	G										T		B		T	T
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	A	V	R	D	G	R	I	K	P	G	Q	L	V	L	L	E	A	F	G	G	G	F	T	W	G	S	A	L	V	R	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	R	L	F	D	E	G	G	V	E	E	G	A	R	G	L	L	A	G	F	G	P	G	I	T	A	E	M	S	L	G	C	W
Template Known Secondary structure							S					S	S										T	T	T
Template Predicted Secondary structure
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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