Job Description P0A6R0 Confidence 100.00% Date Thu Jan 5 11:03:43 GMT 2012 Rank 27 Aligned Residues 302 % Identity 20% Template c1txtB_ PDB info PDB header:lyase Chain: B: PDB Molecule:3-hydroxy-3-methylglutaryl-coa synthase; PDBTitle: staphylococcus aureus 3-hydroxy-3-methylglutaryl-coa2 synthase Resolution 2.50 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	K	I	I	G	T	G	S	Y	L	P	E	Q	V	R	T	N	A	D	L	E	K	M	V	D	T	S	D	E	W	I	V	T	R	T	G	I	R	E	R	H	I	A	A	P	N	E	T	V	S	T	M	G	F	E	A	A	T	R	A	I	E	M	A	G	I	E	K	D	Q	I	G	L	I	V	V	A	T	T	S
Query Conservation
Alig confidence																																																																		.	.
Template Conservation																																																																		.	.
Template Sequence		I	G	I	D	K	I	N	F	Y	V	P	K	Y	Y	V	D	M	A	K	L	A	E	A	R	Q	V	D	P	N	K	F	L	I	G	I	G	Q	T	E	M	A	V	S	P	V	N	Q	D	I	V	S	M	G	A	N	A	A	K	D	I	I	T	D	E	.	.	D	K	K	K	I	G	M	V	I	V	A	T	E	S
Template Known Secondary structure													S												T	T	S							T	T	T										T	T													T	T					.	.													S	S
Template Predicted Secondary structure																																																																		.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.			.	.	.	70	.	.	.	.	.	.	.	.	.	80
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	H	A	F	P	S	A	A	C	Q	I	Q	S	M	L	G	I	K	G	C	P	A	F	D	V	A	A	A	C	A	G	F	T	Y	A	L	S	V	A	D	Q	Y	V	K	S	G	A	V	K	Y	A	L	V	V	G	S	D	V	L	A	R	T	C	D	P	T	D	R	G	T	I	I	I	F	G	D	G	A	G
Query Conservation
Alig confidence																																																																									.	.	.
Template Conservation																																																																									.	.	.
Template Sequence		A	V	D	A	A	K	A	A	A	V	Q	I	H	N	L	L	G	I	Q	P	F	A	R	C	F	E	M	K	E	A	Y	A	A	T	P	A	I	Q	L	A	K	D	Y	L	A	T	R	P	N	E	K	V	L	V	I	A	T	D	T	A	R	Y	G	L	N	S	G	G	E	P	T	.	.	.	Q	G	A	G	A	V
Template Known Secondary structure			S		S	S	S										T	T			S	S											T													T	T		T	T															T	T		S	S	G	G	G	.	.	.
Template Predicted Secondary structure																																																																									.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.				.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	V	L	A	A	S	E	E	P	G	I	I	S	T	H	L	H	A	D	G	S	Y	G	E	L	L	T	L	P	N	A	D	R	V	N	P	E	N	S	I	H	L	T	M	A	G	N	E	V	F	K	V	A	V	T	E	L	A	H	I	V	D	E	T	L	A	A	N	N	L	D	R	S	Q	L	D	W	L	V
Query Conservation
Alig confidence																	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.
Template Sequence		A	M	V	I	A	H	N	P	S	I	L	A	L	N	E	.	.	.	.	.	.	.	D	A	V	A	Y	T	E	D	V	Y	D	F	W	R	P	T	G	H	K	Y	P	L	V	D	G	A	L	S	K	D	A	Y	I	R	S	F	Q	Q	S	W	N	E	Y	A	K	R	Q	G	K	S	L	A	D	F	A	S	L	C
Template Known Secondary structure								S		S	S					S	.	.	.	.	.	.	.											S					T	T		S	S																												T			G	G	G		S
Template Predicted Secondary structure																	.	.	.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.								.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.						.	260	.	.	.	.	.	.	.	.	.	270								.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																		.	.	.	.	.													.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.													.	.	.	.	.	.	.
Query Sequence		P	H	Q	A	N	L	R	I	I	S	A	T	A	K	K	L	.	.	.	.	.	G	M	S	M	D	N	V	V	V	T	L	D	.	.	.	.	.	.	.	R	H	G	N	T	S	A	A	S	V	P	C	A	L	D	E	A	V	R	D	G	R	I	K	P	G	Q	L	V	L	L	E	A	F	G	G	G	F	T	W
Query Conservation																		.	.	.	.	.													.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.													.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	H	V	P	F	T	K	M	G	K	K	A	L	E	S	I	I	D	N	A	D	E	T	T	Q	E	R	L	R	S	G	Y	E	D	A	V	D	Y	N	R	Y	V	G	N	I	Y	T	G	S	L	Y	L	S	L	I	S	L	L	E	N	R	D	L	Q	A	G	E	T	I	G	L	F	S	Y	G	S	G	S	V	V
Template Known Secondary structure					S	S													T	T	S																T	T	T	G	G	G	T				G	G	G													S				T	T										T	T	T
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		311	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	A	L	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	F	Y	S	A	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions