Job Description P32132 Confidence 97.83% Date Thu Jan 5 11:49:17 GMT 2012 Rank 271 Aligned Residues 122 % Identity 25% Template c3snhA_ PDB info PDB header:endocytosis Chain: A: PDB Molecule:dynamin-1; PDBTitle: crystal structure of nucleotide-free human dynamin1 Resolution 3.70 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.																								.	.	.	.	.	.	.	.										50	.	.	.	.
Predicted Secondary structure																											.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.
Query SS confidence																											.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.
Query Sequence		I	A	I	I	A	H	V	D	H	G	K	T	T	L	V	D	K	L	L	Q	Q	S	G	T	F	.	D	S	R	A	E	T	Q	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	M	D	S	N	D	L	E	.	.	.	.	.	.	.	.	.	K	E	R	G	I
Query Conservation																											.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.					.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.
Template Sequence		I	A	V	V	G	G	Q	S	A	G	K	S	S	V	L	E	N	F	.	.	.	V	G	R	D	F	L	P	R	G	S	G	T	R	R	P	L	V	L	Q	L	V	N	A	T	T	E	Y	A	E	F	L	H	C	K	G	K	K	F	T	D	F	E	E	V	R	L	E	I	E	A	E	T	D	R	V	T	K	G	I
Template Known Secondary structure								T	T											.	.	.		T	S			S		S	S					S										S	S						T	T	T		S			B																	T
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.				.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		55	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.	.	.	90	.						.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																.										.	.															.	.	.	.	.																		.
Query SS confidence																.										.	.															.	.	.	.	.																		.
Query Sequence		T	I	L	A	K	N	T	A	I	K	W	N	D	Y	.	R	I	N	I	V	D	T	P	G	.	.	H	A	D	F	G	G	E	V	E	R	V	M	S	M	.	.	.	.	.	V	D	S	V	L	L	V	V	D	A	F	D	G	P	M	P	Q	.	T	R	F	V	T	K	K	A	F	A	Y	G	L	K	P	I	V
Query Conservation																.										.	.															.	.	.	.	.																		.
Alig confidence																.										.	.															.	.	.	.	.																		.
Template Conservation
Template Sequence		S	P	V	P	I	N	L	R	V	Y	S	P	H	V	L	N	L	T	L	V	D	L	P	G	M	T	K	P	D	I	E	F	Q	I	R	D	M	L	M	Q	F	V	T	K	E	N	C	L	I	L	A	V	S	P	A	N	S	D	L	A	N	S	D	A	L	K	V	A	K	E	V	D	P	Q	G	Q	R	T	I	G
Template Known Secondary structure			S										S	S	S		S																												S	T	T									T	T	S		S	T	T												S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		126	.	.	.	130	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	N	K	V	D	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	T	K	L	D	L
Template Known Secondary structure						S	T	T
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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