Job Description P32132 Confidence 99.48% Date Thu Jan 5 11:49:17 GMT 2012 Rank 77 Aligned Residues 172 % Identity 15% Template c3r7wC_ PDB info PDB header:protein transport Chain: C: PDB Molecule:gtp-binding protein gtr1; PDBTitle: crystal structure of gtr1p-gtr2p complex Resolution 2.77 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																															.														.	.	.	.	.
Query SS confidence																																																															.														.	.	.	.	.
Query Sequence		I	A	I	I	A	H	V	D	H	G	K	T	T	L	V	D	K	L	L	Q	Q	S	G	T	F	D	S	R	A	E	T	Q	E	R	V	M	D	S	N	D	L	E	K	E	R	G	I	T	I	L	A	K	N	T	A	I	K	W	N	D	Y	.	R	I	N	I	V	D	T	P	G	H	A	D	F	.	.	.	.	.
Query Conservation																																																															.														.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.														.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	L	X	G	R	S	G	S	G	K	S	S	X	R	S	I	I	F	S	N	Y	S	A	F	D	T	R	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	T	I	D	V	E	H	S	H	L	R	F	L	G	N	X	T	L	N	L	W	D	C	G	G	Q	D	V	F	X	E	N	Y	F
Template Known Secondary structure								T	T	S											S				T	T	G	G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S									T	T	T											S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.																.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.							120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.														.
Query SS confidence																																								.	.	.	.	.	.														.
Query Sequence		G	G	E	V	E	R	V	M	S	M	V	D	S	V	L	L	V	V	D	A	F	D	G	P	M	P	Q	T	R	F	V	T	K	K	A	F	A	Y	.	.	.	.	.	.	G	L	K	P	I	V	V	I	N	K	V	D	R	.	P	G	A	R	P	D	W	V	V	D	Q	V	F	D	L	F	V	N	L	D	A	T
Query Conservation																																								.	.	.	.	.	.														.
Alig confidence																																								.	.	.	.	.	.														.
Template Conservation
Template Sequence		T	K	Q	K	D	H	I	F	Q	X	V	Q	V	L	I	H	V	F	D	V	E	S	T	E	V	L	K	D	I	E	I	F	A	K	A	L	K	Q	L	R	K	Y	S	P	D	A	K	I	F	V	L	L	H	K	X	D	L	V	Q	L	D	K	R	E	E	L	F	Q	I	X	X	K	N	L	S	E	T	S	S	E
Template Known Secondary structure		T	T	T						T	T										T	T		T	T																				T	T										T	T	S	S																						T
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	Q	L	D	F	P	I	V	Y	A	S	A	L	N	G	I	A	G	L	D	H	E	D	M	A	E	D	M	T	P	L	Y	Q	A	I	V	D	H	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	G	F	P	N	L	I	G	F	P	T	S	I	W	D	E	S	L	Y	K	A	W	S	Q	I	V	C	S	L	I	P	N	X	S	N	H	Q	S	N	L
Template Known Secondary structure		T	T			S								T	T	S	T												T	T		S	T
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions