Job Description P32132 Confidence 98.23% Date Thu Jan 5 11:49:17 GMT 2012 Rank 220 Aligned Residues 181 % Identity 19% Template c3ohmA_ PDB info PDB header:signaling protein / hydrolase Chain: A: PDB Molecule:guanine nucleotide-binding protein g(q) subunit alpha; PDBTitle: crystal structure of activated g alpha q bound to its effector2 phospholipase c beta 3 Resolution 2.70 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.
Predicted Secondary structure																									.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	K	L	R	N	I	A	I	I	A	H	V	D	H	G	K	T	T	L	V	D	K	L	.	L	Q	Q	S	G	T	F	D	S	R	A	E	T	Q	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																									.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	R	E	L	K	L	L	L	L	G	T	G	E	S	G	K	S	T	F	I	K	Q	M	R	I	I	H	G	S	G	Y	S	D	E	D	K	R	G	F	T	K	L	V	Y	Q	N	I	F	T	A	M	Q	A	M	I	R	A	M	D	T	L	K	I	P	Y	K	Y	E	H	N	K	A	H	A	Q	L	V	R	E	V
Template Known Secondary structure												S	T	T	S	S													S										T	T																						T	T				S	S	T											T
Template Predicted Secondary structure
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
																																																						42	.	.	.	.	.	.	.					50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	M	D	S	N	D	L	E	.	.	.	.	K	E	R	G	I	T	I	L	A	K	N	T	A	I	K	W
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.
Template Conservation
Template Sequence		D	V	E	K	V	S	A	F	E	N	P	Y	V	D	A	I	K	S	L	W	N	D	P	G	I	Q	E	C	Y	D	R	R	R	E	Y	Q	L	S	D	S	T	K	Y	Y	L	N	D	L	D	R	V	A	D	P	S	Y	L	P	T	Q	Q	D	V	L	R	V	R	V	P	T	T	G	I	I	E	Y	P	F	D	L
Template Known Secondary structure			G	G	G						T	T										T										G	G	G	G	S				T	T						T	T						S	T	T									T	T							S
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.												.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120					.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Query Sequence		N	D	Y	R	I	N	I	V	D	T	P	G	H	A	D	F	G	G	E	V	E	R	V	M	S	M	V	D	S	V	L	L	V	V	D	A	F	D	.	.	.	.	.	.	.	.	.	.	.	G	P	M	P	Q	T	R	F	V	T	K	K	A	F	A	Y	G	.	.	.	.	L	K	P	I	V	V	I	N	K	V
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation
Template Sequence		Q	S	V	I	F	R	M	V	D	V	G	G	Q	R	S	E	R	R	K	W	I	H	C	F	E	N	V	T	S	I	M	F	L	V	A	L	S	E	Y	D	Q	V	L	V	E	S	D	N	E	N	R	M	E	E	S	K	A	L	F	R	T	I	I	T	Y	P	W	F	Q	N	S	S	V	I	L	F	L	N	K	K
Template Known Secondary structure		T	T											S					T	T	G	G	G	G		S	S		S								G	G	G	G	G		B		S	S		T	T	S	B														T	S	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		131	.																				.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	A	R	P	D	W	V	V	D	Q	V	F	D	L	F	V	N	L	D	A	T	D	E	Q	L	D	F	P	I	V	Y	A	S	A	L	N	G	I	A	G	L	D	H	E	D	M	A	E	D	M	T	P	L	Y	Q	A	I	V
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.													.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.													.	.	.	.	.	.	.	.	.	.
Template Sequence		D	L	L	E	E	K	I	M	Y	S	H	L	V	D	Y	F	P	E	Y	D	G	P	Q	R	D	A	Q	A	A	R	E	F	I	L	K	M	F	V	D	L	N	P	D	S	D	.	K	I	I	Y	S	H	F	T	C	A	T	D	.	.	.	.	.	.	.	.	.	.	T	E	N	I	R	F	V	F	A	A	V	K
Template Known Secondary structure								T	T	T	S		G	G	G	T		T	T			S		S	S															S	S		T	T	T	T	.	S									T	T		.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																															.													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.	.											.	.	.	.	.	.	340	.	.	.	.	.
		192	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	H	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	T	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		346	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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