Job Description P32132 Confidence 100.00% Date Thu Jan 5 11:49:17 GMT 2012 Rank 18 Aligned Residues 259 % Identity 30% Template c3mmpC_ PDB info PDB header:transferase Chain: C: PDB Molecule:elongation factor tu 2, elongation factor ts; PDBTitle: structure of the qb replicase, an rna-dependent rna polymerase2 consisting of viral and host proteins Resolution 2.50 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	A	I	I	A	H	V	D	H	G	K	T	T	L	V	D	K	L	L	Q	Q	S	G	T	F	D	S	R	A	E	T	Q	E	R	V	M	D	S	N	D	L	E	K	E	R	G	I	T	I	L	A	K	N	T	A	I	K	W	N	D	Y	R	I	N	I	V	D	T	P	G	H	A	D	F	G	G	E	V	E
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.
Template Sequence		N	V	G	T	I	G	H	V	D	H	G	K	T	T	L	T	A	A	I	T	T	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	K	T	Y	G	G	T	S	H	V	E	.	.	.	Y	D	T	P	T	R	H	Y	A	H	V	D	C	P	G	H	A	D	Y	V	K	N	M	I
Template Known Secondary structure									T	T	S													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.				S	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.
Template SS confidence
		1013	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.																				.	.	.	.	.	1040	.	.	.	.	.	.				.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																																						.															.	.
Query SS confidence																																						.															.	.
Query Sequence		R	V	M	S	M	V	D	S	V	L	L	V	V	D	A	F	D	G	P	M	P	Q	T	R	F	V	T	K	K	A	F	A	Y	G	L	K	.	P	I	V	V	I	N	K	V	D	R	P	G	A	R	.	.	P	D	W	V	V	D	Q	V	F	D	L	F	V	N	L	D	A	T	D	E	Q	L	D	F	P	I	V
Query Conservation																																						.															.	.
Alig confidence																																						.															.	.																					.	.
Template Conservation																																																																											.	.
Template Sequence		T	G	A	A	Q	M	D	G	A	I	L	V	V	A	A	T	D	G	P	M	P	Q	T	R	E	H	I	L	L	G	R	Q	V	G	V	P	Y	I	I	V	F	L	N	K	C	D	M	V	D	D	E	E	L	L	E	L	V	E	M	E	V	R	E	L	L	S	Q	Y	D	F	P	G	D	.	.	D	T	P	I	V
Template Known Secondary structure			T	S				S								T	T	T				T	T											T	T		S									G	G	G																					T	T	S		G	G	.	.	G
Template Predicted Secondary structure																																																																											.	.
Template SS confidence
		1093	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.			.	.	.	.	1170
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	S	A	L	N	G	I	A	G	L	D	H	E	D	M	A	E	D	M	T	P	L	Y	Q	A	I	V	D	H	V	P	A	P	D	V	D	L	D	G	P	F	Q	M	Q	I	S	Q	L	D	Y	N	S	Y	V	G	V	I	G	I	G	R	I	K	R	G	K	V	K	P	N	Q	Q	V	T	I	I	D	S	E
Query Conservation
Alig confidence													.	.
Template Conservation													.	.
Template Sequence		R	G	S	A	L	K	A	L	E	G	D	.	.	A	E	W	E	A	K	I	L	E	L	A	G	F	L	D	S	Y	I	P	E	P	E	R	A	I	D	K	P	F	L	L	P	I	E	D	V	F	S	I	S	G	R	G	T	V	V	T	G	R	V	E	R	G	I	I	K	V	G	E	E	V	E	I	V	G	I	K
Template Known Secondary structure											T		.	.																		S						G	G	G	S													T	T	T										B	S				T	T							S	S	S
Template Predicted Secondary structure													.	.
Template SS confidence
		1171	.	.	.	.	.	.	.	.	1180	.			.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.					.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.
Query SS confidence																																				.	.	.	.
Query Sequence		G	K	T	R	N	A	K	V	G	K	V	L	G	H	L	G	L	E	R	I	E	T	D	L	A	E	A	G	D	I	V	A	I	T	.	.	.	.	G	L	G	E	L	N	I	S	D	T	V	C	D	T	Q	N	V	E	A
Query Conservation																																				.	.	.	.
Alig confidence							.									.	.	.	.																	.	.	.	.
Template Conservation							.									.	.	.	.
Template Sequence		E	T	Q	K	S	.	T	C	T	G	V	E	M	F	.	.	.	.	R	K	L	L	D	E	G	R	A	G	E	N	V	G	V	L	L	R	G	I	K	R	E	E	I	E	R	G	Q	V	L	A	K	P	G	T	I	K	P
Template Known Secondary structure							.								S	.	.	.	.	S				S				T	T								S	S			G	G	G			T	T						T	T	S
Template Predicted Secondary structure							.									.	.	.	.
Template SS confidence
		1249	1250	.	.	.		.	.	.	.	.	.	1260	.					.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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