Job Description P32132 Confidence 98.27% Date Thu Jan 5 11:49:17 GMT 2012 Rank 213 Aligned Residues 146 % Identity 15% Template c3l82B_ PDB info PDB header:cell cycle Chain: B: PDB Molecule:f-box only protein 4; PDBTitle: x-ray crystal structure of trf1 and fbx4 complex Resolution 2.40 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		I	A	I	I	A	H	V	D	H	G	K	T	T	L	V	D	K	L	L	Q	Q	S	G	T	F	D	S	R	A	E	T	Q	E	R	V	M	D	S	N	D	L	E	K	E	R	G	I	T	I	L	A	K	N	T	A	I	K	W	N	D	Y	R	I	N	I	V	D	T	P	G	H	A	D	F	G	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.										.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Sequence		F	A	X	F	G	P	G	L	E	E	L	N	T	S	L	V	L	S	L	X	S	S	E	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	P	T	A	G	L	P	Q	R	Q	I	D	G	I	G	S	G	V	N	F	.	Q	L	N	N	Q	H	K	F	N	I	L	I	L	Y
Template Known Secondary structure							G	G	G	T	S	S	S	S								T			S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							G	G	G			T	T	S							.		S	S	S	S									S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.																					.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.
				83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.									.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure		.	.																																					.	.	.	.	.	.	.	.											.
Query SS confidence		.	.																																					.	.	.	.	.	.	.	.											.
Query Sequence		.	.	G	E	V	E	R	V	M	S	M	V	D	S	V	L	L	V	V	D	A	F	D	G	P	M	P	Q	T	R	F	V	T	K	K	A	F	A	.	.	.	.	.	.	.	.	Y	G	L	K	P	I	V	V	I	N	.	K	V	D	R	P	G	A	R	P	D	W	V	V	D	Q	V	F	D	L	F	V	N	L
Query Conservation		.	.																																					.	.	.	.	.	.	.	.											.
Alig confidence		.	.																																					.	.	.	.	.	.	.	.											.																.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.
Template Sequence		S	T	P	Q	I	Q	K	V	C	E	V	V	D	G	F	I	Y	V	A	N	A	E	A	H	K	R	H	E	W	Q	D	E	F	S	H	I	X	A	X	T	D	P	A	F	G	S	S	G	R	P	L	L	V	L	S	C	I	S	Q	G	D	V	K	R	X	P	C	F	Y	L	A	H	.	.	.	.	.	.	E	L
Template Known Secondary structure														S									B	T	T																S		T	T	S	S		S		S									S	S	T	T	S		B									.	.	.	.	.	.		T
Template Predicted Secondary structure																																																																										.	.	.	.	.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.							310	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	T	D	E	Q	L	D	F	P	I	V	Y	A	S	A	L	N	G	I	A	G	L	D	H	E	D	M	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	L	N	L	L	N	H	P	W	L	V	Q	D	T	E	A	E	T	L	T	G	F	L	N	G	I	E	W	I
Template Known Secondary structure		T	G	G	G	G		S									T	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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