Job Description P32132 Confidence 100.00% Date Thu Jan 5 11:49:17 GMT 2012 Rank 13 Aligned Residues 307 % Identity 23% Template c3izq1_ PDB info PDB header:ribosomal protein,hydrolase Chain: 1: PDB Molecule:elongation factor 1 alpha-like protein; PDBTitle: structure of the dom34-hbs1-gdpnp complex bound to a translating2 ribosome Resolution 9.50 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.																40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	I	A	I	I	A	H	V	D	H	G	K	T	T	L	V	D	K	L	L	Q	Q	S	G	T	F	D	S	R	A	E	T	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	V	M	D	S	N	D	L	E	K	E	R	G	I	T	I	L	A	K	N	T	A	I	K	W	N	D	Y	R	I	N
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	F	V	V	L	G	H	V	D	A	G	K	S	T	L	M	G	R	L	L	Y	D	L	N	I	V	N	Q	S	Q	L	R	K	L	Q	R	E	S	E	T	M	G	K	S	S	F	K	F	A	W	I	M	D	Q	T	N	E	E	R	E	R	G	V	T	V	S	I	C	T	S	H	F	S	T	H	R	A	N	F	T
Template Known Secondary structure									S	S	S											S		S	S		S												S	S		S	S	S	S			S	S	S												T	T	T			S		S							S	S
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.								.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140
Predicted Secondary structure																																			.	.	.	.	.	.	.																			.															.	.	.
Query SS confidence																																			.	.	.	.	.	.	.																			.															.	.	.
Query Sequence		I	V	D	T	P	G	H	A	D	F	G	G	E	V	E	R	V	M	S	M	V	D	S	V	L	L	V	V	D	A	F	D	G	.	.	.	.	.	.	.	P	M	P	Q	T	R	F	V	T	K	K	A	F	A	Y	G	L	K	.	P	I	V	V	I	N	K	V	D	R	P	G	A	R	.	.	.	P	D	W	V
Query Conservation																																			.	.	.	.	.	.	.																			.															.	.	.
Alig confidence																																			.	.	.	.	.	.	.																			.															.	.	.
Template Conservation
Template Sequence		I	V	D	A	P	G	H	R	D	F	V	P	N	A	I	M	G	I	S	Q	A	D	M	A	I	L	C	V	D	C	S	T	N	A	F	E	S	G	F	D	L	D	G	Q	T	K	E	H	M	L	L	A	S	S	L	G	I	H	N	L	I	I	A	M	N	K	M	D	N	V	D	W	S	Q	Q	R	F	E	E	I
Template Known Secondary structure							S	S	S							T	T	T	S	S			S									S						T	T			T	T	S											T	T	T											T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.									.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.			200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																																								.	.	.	.	.	.	.	.																						.	.
Query SS confidence																																								.	.	.	.	.	.	.	.																						.	.
Query Sequence		V	D	Q	V	F	D	L	F	V	N	L	D	A	T	D	E	Q	L	D	F	P	I	V	Y	A	S	A	L	N	G	I	A	G	L	D	H	E	D	.	.	.	.	.	.	.	.	M	A	E	D	M	T	P	L	Y	Q	A	I	V	D	H	V	P	A	P	D	V	.	.	D	L	D	G	P	F	Q	M	Q	I	S
Query Conservation																																								.	.	.	.	.	.	.	.																						.	.
Alig confidence																.	.																							.	.	.	.	.	.	.	.																						.	.
Template Conservation																.	.
Template Sequence		K	S	K	L	L	P	Y	L	V	D	I	G	F	F	.	.	E	D	N	I	N	W	V	P	I	S	G	F	S	G	E	G	V	Y	K	I	E	Y	T	D	E	V	R	Q	W	Y	N	G	P	N	L	M	S	T	L	E	N	A	A	F	K	I	S	K	E	N	E	G	I	N	K	D	D	P	F	L	F	S	V	L
Template Known Secondary structure													T			.	.	G	G	G								T	T	T		T	T	T	S	S		T	T	S		T	T			S			S								T	T	S							S	S	S			S			S
Template Predicted Secondary structure																.	.
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.			.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
		211	.	.	.				.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.					.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.					.	.
Predicted Secondary structure						.	.	.																																											.	.	.	.																						.	.	.	.
Query SS confidence						.	.	.																																											.	.	.	.																						.	.	.	.
Query Sequence		Q	L	D	Y	.	.	.	N	S	Y	V	G	V	I	G	I	G	R	I	K	R	G	K	V	K	P	N	Q	Q	V	T	I	I	D	S	E	G	K	T	R	N	A	K	V	G	K	V	L	G	.	.	.	.	H	L	G	L	E	R	I	E	T	D	L	A	E	A	G	D	I	V	A	I	T	.	.	.	.	G	L
Query Conservation						.	.	.																																											.	.	.	.																						.	.	.	.
Alig confidence						.	.	.																														.	.	.											.	.	.	.																						.	.	.	.
Template Conservation																																						.	.	.
Template Sequence		E	I	I	P	S	K	K	T	S	N	D	L	A	L	V	S	G	K	L	E	S	G	S	I	Q	P	G	E	S	L	T	I	Y	P	S	E	.	.	.	Q	S	C	I	V	D	K	I	Q	V	G	S	Q	Q	G	Q	S	T	N	H	E	E	T	D	V	A	I	K	G	D	F	V	T	L	K	L	R	K	A	Y	P
Template Known Secondary structure							S	S	S		S	S	S	S									S				T	T						T	T	T	T	.	.	.											S	S			S		S	S	S									T	T								S	S			T
Template Predicted Secondary structure																																						.	.	.
Template SS confidence
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.				.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	L	N	I	S	D	T	V	C	D	T	Q	N	V	E	A	L	P	A	L	S	V	D	E	P	T	V	S	M	F	F	C	V	N	T	S	P	F	C	G	K	E	G
Query Conservation
Alig confidence																									.	.	.	.	.
Template Conservation																									.	.	.	.	.
Template Sequence		E	D	I	Q	N	G	D	L	A	A	S	V	D	Y	S	S	I	H	S	A	Q	C	F	.	.	.	.	.	V	L	E	L	T	T	F	D	M	N	R	P	L	L	P	G
Template Known Secondary structure		T	S			T	T				B		S	T	T		S				B	S			.	.	.	.	.								S		S	S		B		T	T
Template Predicted Secondary structure																									.	.	.	.	.
Template SS confidence
		484	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.						.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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