Job Description P32132 Confidence 99.61% Date Thu Jan 5 11:49:17 GMT 2012 Rank 58 Aligned Residues 157 % Identity 27% Template c3ievA_ PDB info PDB header:nucleotide binding protein/rna Chain: A: PDB Molecule:gtp-binding protein era; PDBTitle: crystal structure of era in complex with mggnp and the 3' end of 16s2 rrna Resolution 1.90 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.											.	.	.	.	.	.	.	.
Query SS confidence																																																															.											.	.	.	.	.	.	.	.
Query Sequence		N	I	A	I	I	A	H	V	D	H	G	K	T	T	L	V	D	K	L	L	Q	Q	S	G	T	F	D	S	R	A	E	T	Q	E	R	V	M	D	S	N	D	L	E	K	E	R	G	I	T	I	L	A	K	N	T	A	I	K	W	N	D	.	Y	R	I	N	I	V	D	T	P	G	.	.	.	.	.	.	.	.
Query Conservation																																																															.											.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.											.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	V	A	I	V	G	K	P	N	V	G	K	S	T	L	L	N	N	L	L	G	T	K	V	S	I	I	S	P	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	T	R	M	R	V	L	G	V	K	N	I	P	N	E	A	Q	I	I	F	L	D	T	P	G	I	Y	E	P	K	K	S	D
Template Known Secondary structure								S	T	T	S	S										T	S			S				S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S									T	T	T																T	T
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.																.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
				78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure		.	.																																											.														.	.
Query SS confidence		.	.																																											.														.	.
Query Sequence		.	.	H	A	D	F	G	G	E	V	E	R	V	M	S	M	V	D	S	V	L	L	V	V	D	A	F	D	G	P	M	P	Q	T	R	F	V	T	K	K	A	F	A	Y	.	G	L	K	P	I	V	V	I	N	K	V	D	R	.	.	P	G	A	R	P	D	W	V	V	D	Q	V	F	D	L	F	V	N	L	D
Query Conservation		.	.																																											.														.	.
Alig confidence		.	.																																											.														.	.																	.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		V	L	G	H	S	M	V	E	I	A	K	Q	S	L	E	E	A	D	V	I	L	F	M	I	D	A	T	E	G	W	R	P	R	D	E	E	I	Y	Q	N	F	I	K	P	L	N	K	P	V	I	V	V	I	N	K	I	D	K	I	G	P	A	K	N	V	L	P	L	I	D	E	I	H	K	K	H	.	.	.	.
Template Known Secondary structure																			S								T	T	T	B	S												T	G	G	G											G	G	G	S	S	S	G	G	G	G												.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	D	E	Q	L	D	F	P	I	V	Y	A	S	A	L	N	G	I	A	G	L	D	H	E	D	M	A	E	D	M	T	P	L	Y	Q	A	I	V	D	H	V	P	A
Query Conservation
Alig confidence		.	.	.	.																.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.																.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	P	E	L	T	E	I	V	P	I	S	A	L	K	G	A	.	.	.	.	.	.	.	.	.	.	N	L	D	E	L	V	K	T	I	L	K	Y	L	P	E
Template Known Secondary structure		.	.	.	.	T	T								B	T	T	T	T	B	.	.	.	.	.	.	.	.	.	.	S												S		B
Template Predicted Secondary structure		.	.	.	.																.	.	.	.	.	.	.	.	.	.
Template SS confidence
						146	.	.	.	150	.	.	.	.	.	.	.	.	.	160											.	.	.	.	.	.	.	.	.	170	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions