Job Description P32132 Confidence 98.72% Date Thu Jan 5 11:49:17 GMT 2012 Rank 143 Aligned Residues 112 % Identity 16% Template c3dpuA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:rab family protein; PDBTitle: roccor domain tandem of rab family protein (roco) Resolution 2.90 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	I	I	A	H	V	D	H	G	K	T	T	L	V	D	K	L	L	Q	Q	S	G	T	F	D	S	R	A	E	T	Q	E	R	V	M	D	S	N	D	L	E	K	E	R	G	I	T	I	L	A	K	N	T	A	I	K	W	N	D	Y	R	I	N	I	V	D	T	P	G	H	A	D	F	G	G	E	V	E	R
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Template Sequence		V	H	L	I	G	D	G	M	A	G	K	T	S	L	L	K	Q	L	I	.	.	.	.	.	.	.	.	.	.	.	.	G	G	L	N	V	V	T	K	Q	A	P	N	I	K	G	L	E	N	D	D	E	.	.	.	.	.	L	K	E	C	L	F	H	F	W	D	F	G	G	Q	E	I	M	H	A	S	H	Q	F
Template Known Secondary structure						S	S	S		S	S										.	.	.	.	.	.	.	.	.	.	.	.										G	G	G	S	G	G	G	T	T		S	T	.	.	.	.	.	T	T	T										S			T	T	T	T	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Template SS confidence
		455	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.													.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.						.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	S	M	V	D	S	V	L	L	V	V	D	A	F	D	G	P	M	P	Q	T	R	F	V	T	K	K	A	F	A	Y	G	L	K	P	I	V	V	I	N	K	V	D	R	P	G	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	M	T	R	S	S	V	Y	M	L	L	L	D	S	R	T	D	S	N	K	H	Y	W	L	R	H	I	E	K	Y	G	G	K	S	P	V	I	V	V	M	N	K	I	D	E	N	P	S	Y
Template Known Secondary structure					S	S									G	G	G	G	G	G												S	S	S										T	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		529	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions