Job Description P32132 Confidence 97.67% Date Thu Jan 5 11:49:17 GMT 2012 Rank 288 Aligned Residues 120 % Identity 19% Template c3dmdA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:signal recognition particle receptor; PDBTitle: structures and conformations in solution of the signal recognition2 particle receptor from the archaeon pyrococcus furiosus Resolution 2.21 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.										.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.														.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	I	I	A	H	V	D	H	G	K	T	T	L	V	D	K	L	L	Q	Q	S	G	T	F	D	S	R	A	E	T	Q	E	R	V	M	D	S	N	.	.	.	.	.	.	.	.	.	D	L	E	K	E	R	G	I	T	I	L	A	K	N	T	A	I	K	.	.	.	.	.	.	.	.	.	.	.	.	.	W
Query Conservation																																									.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.																.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.
Template Sequence		I	M	F	V	G	F	N	G	S	G	K	T	T	T	I	A	K	L	A	N	W	L	.	.	K	N	H	G	F	S	V	V	I	A	A	S	D	T	F	R	A	G	A	I	E	Q	L	E	E	H	A	K	R	I	G	V	K	V	I	K	H	S	Y	G	A	D	P	A	A	V	A	Y	D	A	I	Q	H	A	K	A
Template Known Secondary structure								T	T	S	S													.	.			T	T										T	T															T	T							S	T	T
Template Predicted Secondary structure																								.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		66	.	.	.	70	.	.	.	.	.	.	.					.	.	80	.	.	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure														.	.	.	.																.	.
Query SS confidence														.	.	.	.																.	.
Query Sequence		N	D	Y	R	I	N	I	V	D	T	P	G	.	.	.	.	H	A	D	F	G	G	E	V	E	R	V	M	S	M	V	.	.	D	S	V	L	L	V	V	D	A	F	D	G	P	M	P	Q	T	R	F	V	T	K	K	A	F	A	Y	G	L	K	P	I	V	V	I	N	K	V	D
Query Conservation														.	.	.	.																.	.
Alig confidence														.	.	.	.																.	.													.																		.
Template Conservation																																															.																		.
Template Sequence		R	G	I	D	V	V	L	I	D	T	A	G	R	S	E	T	N	R	N	L	M	D	E	M	K	K	I	A	R	V	T	K	P	N	L	V	I	F	V	G	D	A	L	A	G	.	N	A	I	V	E	Q	A	R	Q	F	N	E	A	V	K	I	D	.	G	I	I	L	T	K	L	D
Template Known Secondary structure			T		S								S	S			S	S	S																S								T	T		T	.	T	T												S				.						S	G	G
Template Predicted Secondary structure																																															.																		.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.		.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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