Job Description P32132 Confidence 99.15% Date Thu Jan 5 11:49:17 GMT 2012 Rank 106 Aligned Residues 156 % Identity 16% Template c3c5hA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:glucocorticoid receptor dna-binding factor 1; PDBTitle: crystal structure of the ras homolog domain of human grlf12 (p190rhogap) Resolution 1.80 Å

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		7	.	.	10	.	.	.	.	.	.										.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.																																																										.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.																																																										.	.	.	.
Query Sequence		N	I	A	I	I	A	H	V	D	H	.	.	.	.	.	.	.	.	.	G	K	T	T	L	V	D	K	L	L	Q	Q	S	G	T	F	D	S	R	A	E	T	Q	E	R	V	M	D	S	N	D	L	E	K	E	R	G	I	T	I	L	A	K	N	T	A	I	K	W	N	D	Y	R	I	N	I	V	.	.	.	.
Query Conservation												.	.	.	.	.	.	.	.	.																																																										.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.														.	.	.	.	.																																								.	.	.	.
Template Conservation																																		.	.	.	.	.
Template Sequence		N	I	S	V	V	G	L	S	G	T	E	K	E	K	G	Q	C	G	I	G	K	S	C	L	C	N	R	F	V	R	P	S	.	.	.	.	.	A	D	E	F	H	L	D	H	T	S	V	L	S	T	S	D	F	G	G	R	V	V	N	N	D	H	F	L	Y	W	G	E	V	S	K	M	H	I	V	E	Q	T	E
Template Known Secondary structure								S				T	T	T	T	T	T				S												S	.	.	.	.	.	T	T	T			S												T	S	T	T	T	T	T		S
Template Predicted Secondary structure																																		.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.						.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
					74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.																																						.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure		.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Query SS confidence		.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Query Sequence		.	.	.	D	T	P	G	H	A	D	F	G	G	E	V	E	R	V	M	S	M	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	V	L	L	V	V	D	A	F	D	G	P	M	P	Q	T	R	.	.	.
Query Conservation		.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Alig confidence		.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation
Template Sequence		F	I	D	D	Q	T	F	Q	P	H	R	S	T	A	L	Q	P	Y	I	K	R	A	A	A	T	K	L	A	S	A	E	K	L	M	Y	F	C	T	D	Q	L	G	L	E	Q	D	F	E	Q	K	Q	M	P	D	G	K	L	L	V	D	G	F	L	L	G	I	D	V	S	R	N	F	D	D	Q	L	K	F	V	S
Template Known Secondary structure					T	T	T		S	B	T	T	G	G	G									T		S					T	T		B					G	G	G	T	T		G	G	G	S				B		G	G	G														B
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	T	K	K	A	F	A	Y	G	L	K	P	I	V	V	I	N	K	V	D	R	P	G	A	R	P	D	W	V	V	D	Q	V	F	D	L	F	V	N	L	D	A	T	D	E	Q	L	D	F	P	I	V	Y	A	S	A	L	N	G	I	A	G	L	D	H
Query Conservation
Alig confidence																										.	.	.														.	.	.	.	.	.
Template Conservation																										.	.	.														.	.	.	.	.	.
Template Sequence		N	L	Y	N	Q	L	A	K	T	K	K	P	I	V	V	V	L	T	K	C	D	E	G	V	.	.	.	E	R	Y	I	R	D	A	H	T	F	A	L	S	.	.	.	.	.	.	K	K	N	L	Q	V	V	E	T	S	A	R	S	N	V	N	V	D	L	A
Template Known Secondary structure										T	T										G	G	G	B		.	.	.													T	.	.	.	.	.	.	S	S	S							B	T	T	T	T	B	S
Template Predicted Secondary structure																										.	.	.														.	.	.	.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.				.	.	.	210	.	.	.	.	.	.	.	.	.							220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions