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Job DescriptionP32132
Confidence98.20%DateThu Jan 5 11:49:17 GMT 2012
Rank226Aligned Residues145
% Identity17%Templatec3bwdD_
PDB info PDB header:plant proteinChain: D: PDB Molecule:rac-like gtp-binding protein arac6; PDBTitle: crystal structure of the plant rho protein rop5
Resolution1.53 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  KLRNIAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWNDYRINIVDTPGHADFGG
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Template Sequence  RFIKCVTVGDGAVGKTCLLISYTSNT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . FPFSANVVLGLWDTAGEDYNR
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   5....10.........20.........30 .........40.........50.
 
   84.....90.........100..... ....110.........120.........130.........140 .........150..
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Query Sequence  EVERVMSMVDSVLLVVDAFDGP. . . . MPQTRFVTKKAFAYGLKPIVVINKVDRPGARPDWV. . . . . . . VDQVFDLFVNLD
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Template Sequence  LRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLDLRDDKQFFIDHAVPITTVQGEELKKLIG
Template Known Secondary structure  TGGGGGTT
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   70.........80.........90.........100.........110.........120.........130.........140.........
 
   153......160.........170.........180.........190.......
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Query Sequence  ATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQAIVDHVPAP
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Template Sequence  AP. . . . . . AYIECSSKSQENVKG. . . . . . . . . . VFDAAIRVVLQP
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   152. ......160........ .170.........180
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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