Job Description P32132 Confidence 97.79% Date Thu Jan 5 11:49:17 GMT 2012 Rank 276 Aligned Residues 164 % Identity 24% Template c3b9qA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:chloroplast srp receptor homolog, alpha subunit PDBTitle: the crystal structure of cpftsy from arabidopsis thaliana Resolution 1.75 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.										.	50	.	.	.	.	.	.	.	.	.	60	.	.													.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	I	I	A	H	V	D	H	G	K	T	T	L	V	D	K	L	L	Q	Q	S	G	T	F	D	S	R	A	E	T	Q	E	R	V	M	D	S	N	D	L	.	.	.	.	.	.	.	.	.	E	K	E	R	G	I	T	I	L	A	K	N	T	A	.	.	.	.	.	.	.	.	.	.	.	.	I	K	W	N
Query Conservation																																											.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.																		.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.
Template Sequence		I	M	I	V	G	V	N	G	G	G	K	T	T	S	L	G	K	L	A	H	R	L	.	.	K	N	E	G	T	K	V	L	M	A	A	G	D	T	F	R	A	A	A	S	D	Q	L	E	I	W	A	E	R	T	G	C	E	I	V	V	A	E	K	A	K	A	A	T	V	L	S	K	A	V	K	R	G	K	E	E
Template Known Secondary structure								T	T	S														.	.			T	T											S																T																									T
Template Predicted Secondary structure																								.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.			.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		67	.	.	70	.	.	.	.	.	.	.					.	.	80	.	.	.	.	.	.	.	.	.	90	.									.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure													.	.	.	.															.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.															.	.	.	.	.	.	.	.
Query Sequence		D	Y	R	I	N	I	V	D	T	P	G	.	.	.	.	H	A	D	F	G	G	E	V	E	R	V	M	S	M	.	.	.	.	.	.	.	.	V	D	S	V	L	L	V	V	D	A	F	D	G	P	M	P	Q	T	R	F	V	T	K	K	A	F	A	Y	G	L	K	P	I	V	V	I	N	K	V	D	R	P	G
Query Conservation													.	.	.	.															.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.															.	.	.	.	.	.	.	.														.																	.											.
Template Conservation																																																				.																	.											.
Template Sequence		G	Y	D	V	V	L	C	D	T	S	G	R	L	H	T	N	Y	S	L	M	E	E	L	I	A	C	K	K	A	V	G	K	I	V	S	G	A	P	N	E	I	L	L	V	L	D	G	N	T	G	.	L	N	M	L	P	Q	A	R	E	F	N	E	V	V	G	I	.	T	G	L	I	L	T	K	L	D	G	.	S
Template Known Secondary structure		T		S										S	S																		T	T	S	T	T			S								G	G	G	G	.	G	G	G											T			.									S	S	.
Template Predicted Secondary structure																																																				.																	.											.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.		.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.		.	.	.	.	.	.	.	320	.	.		.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	P	D	W	V	V	D	Q	V	F	D	L	F	V	N	L	D	A	T	D	E	Q	L	D	F	P	I	V	Y	A	S	A	L	N	G	I	A	G	L	D	H	E	D	M	A	E	D	M	T	P	L	Y
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	R	G	G	C	V	V	S	V	V	E	.	.	.	.	.	.	.	.	.	.	.	E	L	G	I	P	V	K	F	I	G	V	G	E	A	V	E	D	L	Q	P	F	D	P	E	A	F	V	N	A	I	F
Template Known Secondary structure		S		T									.	.	.	.	.	.	.	.	.	.	.												S	S	S	G	G	G
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.												.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions