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Job DescriptionP32132
Confidence98.50%DateThu Jan 5 11:49:17 GMT 2012
Rank170Aligned Residues139
% Identity19%Templatec2x77B_
PDB info PDB header:gtp-binding proteinChain: B: PDB Molecule:adp-ribosylation factor; PDBTitle: crystal structure of leishmania major adp ribosylation2 factor-like 1.
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  EKLRNIAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWNDYRINIVDTPGHADFG
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Template Sequence  DRKIRVLMLGLDNAGKTSILYRL. . . . . . . . . . . . . . . . . . . . . . . . . HLGDVVTTNLETLQYKNISFEVWDLGGCYF. .
Template Known Secondary structure  SS
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   18.20.........30.........40 .........50.........60.........70
 
   83......90.........100.........110.. .......120.........130.........140.........150.......
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Query Sequence  GEVERVMSMVDSVLLVVDAFDGPMPQTRFV. . . . . TKKAFAYGLKPIVVINKVDRPGARPDWVVDQVFDLFVNLDATDEQ
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Template Sequence  . . . . . . . SDTDAVIYVVDSTDRDRMGVAKHELYALLDEDELRKSLLLIFANKQDLPDAASEAEIAEQLGVS. . . . . SIMN
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   86...90.........100.........110.........120.........130.........140......... 150...
 
   158.160.........170.........180
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Query Sequence  LDFPIVYASALNGIAGLDHEDMA
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Template Sequence  RTWTIVKSSSKTGDGLVEGMDWL
Template Known Secondary structure  S


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   154.....160.........170......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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