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Job DescriptionP32132
Confidence97.61%DateThu Jan 5 11:49:17 GMT 2012
Rank291Aligned Residues166
% Identity24%Templatec2qy9A_
PDB info PDB header:protein transportChain: A: PDB Molecule:cell division protein ftsy; PDBTitle: structure of the ng+1 construct of the e. coli srp receptor2 ftsy
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40......... 50.........60....
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Query Sequence  RNIAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLE. . . . . . . . . KERGITILAKNTAIK. . . . . . . . . . . .
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Template Sequence  FVILMVGVNGVGKTTTIGKLARQF. . EQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIFDAIQAA
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TTS
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TT
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   294.....300.........310....... ..320.........330.........340.........350.........360.........370.
 
   65....70.........80.........90... ......100.........110.........120.........130.
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Query Sequence  . WNDYRINIVDTPGHADFGGEVERVMSMVD. . . . . . . . . . . . SVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVINKVD
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Template Sequence  KARNIDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQ. NAVSQAKLFHEAVGL. TGITLTKLD
Template Known Secondary structure  TT
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GGGTTT
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SGGGT.S

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T
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   372.......380.........390.........400.........410.........420..... ....430.........440 .........
 
   132.......140.........150.........160.........170.........180.......
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Query Sequence  RPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLY
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Template Sequence  G. TAKGGVIFSVAD. . . . . . . . . . . QFGIPIRYIGVGERIEDLRPFKADDFIEALF
Template Known Secondary structure  T.
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SSSGGG

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   450 .........460.. .......470.........480.........490...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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