Job Description P32132 Confidence 97.62% Date Thu Jan 5 11:49:17 GMT 2012 Rank 290 Aligned Residues 169 % Identity 24% Template c2og2A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:putative signal recognition particle receptor; PDBTitle: crystal structure of chloroplast ftsy from arabidopsis2 thaliana Resolution 2.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.										.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	K	L	R	N	I	A	I	I	A	H	V	D	H	G	K	T	T	L	V	D	K	L	L	Q	Q	S	G	T	F	D	S	R	A	E	T	Q	E	R	V	M	D	S	N	.	.	.	.	.	.	.	.	.	D	L	E	K	E	R	G	I	T	I	L	A	K	N	T	A	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																														.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.																.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.
Template Sequence		R	K	P	A	V	I	M	I	V	G	V	N	G	G	G	K	T	T	S	L	G	K	L	A	H	R	L	.	.	K	N	E	G	T	K	V	L	M	A	A	G	D	T	F	R	A	A	A	S	D	Q	L	E	I	W	A	E	R	T	G	C	E	I	V	V	A	E	G	D	K	A	K	A	A	T	V	L	S	K	A
Template Known Secondary structure		S	S	S									T	T	S														.	.			T	T											S																T							S	S	S	S
Template Predicted Secondary structure																													.	.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
					63	.	.	.	.	.	.	70	.	.	.	.	.	.	.					.	.	80	.	.	.	.	.	.	.	.	.	90	.									.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																.	.	.	.															.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																.	.	.	.															.	.	.	.	.	.	.	.
Query Sequence		.	.	.	I	K	W	N	D	Y	R	I	N	I	V	D	T	P	G	.	.	.	.	H	A	D	F	G	G	E	V	E	R	V	M	S	M	.	.	.	.	.	.	.	.	V	D	S	V	L	L	V	V	D	A	F	D	G	P	M	P	Q	T	R	F	V	T	K	K	A	F	A	Y	G	L	K	P	I	V	V	I
Query Conservation		.	.	.																.	.	.	.															.	.	.	.	.	.	.	.
Alig confidence		.	.	.																.	.	.	.															.	.	.	.	.	.	.	.														.																	.
Template Conservation																																																											.																	.
Template Sequence		V	K	R	G	K	E	E	G	Y	D	V	V	L	C	D	T	S	G	R	L	H	T	N	Y	S	L	M	E	E	L	I	A	C	K	K	A	V	G	K	I	V	S	G	A	P	N	E	I	L	L	V	L	D	G	N	T	G	.	L	N	M	L	P	Q	A	R	E	F	N	E	V	V	G	I	.	T	G	L	I	L
Template Known Secondary structure								T	T		S										S	S																				S	T	T			S								G	G	G	G	.	G	G	G											T			.
Template Predicted Secondary structure																																																											.																	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.	.	.	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	K	V	D	R	P	G	A	R	P	D	W	V	V	D	Q	V	F	D	L	F	V	N	L	D	A	T	D	E	Q	L	D	F	P	I	V	Y	A	S	A	L	N	G	I	A	G	L	D	H	E	D	M	A	E	D	M	T	P	L	Y
Query Conservation
Alig confidence							.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	K	L	D	G	.	S	A	R	G	G	C	V	V	S	V	V	E	.	.	.	.	.	.	.	.	.	.	.	E	L	G	I	P	V	K	F	I	G	V	G	E	A	V	E	D	L	Q	P	F	D	P	E	A	F	V	N	A	I	F
Template Known Secondary structure			S		T	T	.		S		T									.	.	.	.	.	.	.	.	.	.	.												S	S	S	G	G	G
Template Predicted Secondary structure							.													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		280	.	.	.	.		.	.	.	.	.	290	.	.	.	.	.	.												.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions