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Job DescriptionP32132
Confidence98.93%DateThu Jan 5 11:49:17 GMT 2012
Rank131Aligned Residues125
% Identity17%Templatec2j69D_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:bacterial dynamin-like protein; PDBTitle: bacterial dynamin-like protein bdlp
Resolution3.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.
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Query Sequence  NIAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  RLLVLGDMKRGKSTFLNALIGENLLPSDVNPCTAVLTVLRYGPEKKVTIHFNDGKSPQQLDFQNFKYKYTIDPAEAKKLE
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   71........80.........90.........100.........110.........120.........130.........140.........150
 
   52.......60....... ..70....... ..80.........90.........100.........110..... ....120
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Query Sequence  . . . RGITILAKNTAIKWND. . . . YRINIVDTPG. . . HADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKK. AFAYG
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Template Sequence  QEKKQAFPDVDYAVVEYPLTLLQKGIEIVDSPGLNDTEARNELSLGYVNNCHAILFVMRASQPCTLGERRYLENYIKGRG
Template Known Secondary structure  TSS

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   151........160.........170.........180.........190.........200.........210.........220.........230
 
   121........130.
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Query Sequence  LKPIVVINKVD
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Template Sequence  LTVFFLVNAWD
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GG
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   231........240.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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